STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIM30361.1Putative membrane-associated HD superfamily hydrolase; PFAM: Sulfite exporter TauE/SafE. (253 aa)    
Predicted Functional Partners:
EIM30362.1
Hypothetical protein.
       0.522
EIM28962.1
Chemotaxis protein CheC, inhibitor of MCP methylation; PFAM: CheC-like family.
  
     0.509
EIM30700.1
Integrase family protein; PFAM: Integrase core domain.
  
     0.452
EIM29398.1
Hypothetical protein.
  
     0.426
EIM27666.1
Hypothetical protein.
  
     0.425
EIM27003.1
Hypothetical protein.
  
     0.408
EIM27898.1
Trypsin-like serine protease with C-terminal PDZ domain; PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF).
  
 
   0.406
Your Current Organism:
Microvirga lotononidis
NCBI taxonomy Id: 864069
Other names: HAMBI 3237, LMG 26455, LMG:26455, M. lotononidis, Microvirga lotononidis Ardley et al. 2012, Microvirga sp. WSM3557, Rhizobiales bacterium WSM3557, strain WSM3557
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.