STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIM29188.1ParB-like partition protein; PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins; Belongs to the ParB family. (295 aa)    
Predicted Functional Partners:
EIM29189.1
ATPase involved in chromosome partitioning; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
 
 
 0.977
rsmG
16S rRNA (guanine(527)-N(7))-methyltransferase GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
  
  
 0.907
mnmG
Glucose-inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
  
  
 0.761
EIM28452.1
DNA segregation ATPase, FtsK/SpoIIIE family; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family; Belongs to the FtsK/SpoIIIE/SftA family.
  
   
 0.760
EIM29173.1
DNA segregation ATPase, FtsK/SpoIIIE family; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family.
  
   
 0.759
EIM26668.1
Plasmid partitioning protein RepA; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: plasmid partitioning protein RepA.
 
 
 0.747
EIM31248.1
Plasmid partitioning protein RepA; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: plasmid partitioning protein RepA.
 
 
 0.723
EIM26211.1
Plasmid partitioning protein RepA; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: plasmid partitioning protein RepA.
 
 
 0.722
EIM26215.1
Plasmid partitioning protein RepA; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: plasmid partitioning protein RepA.
 
 
 0.719
EIM24736.1
PFAM: Protein of unknown function (DUF2497).
    
 
 0.714
Your Current Organism:
Microvirga lotononidis
NCBI taxonomy Id: 864069
Other names: HAMBI 3237, LMG 26455, LMG:26455, M. lotononidis, Microvirga lotononidis Ardley et al. 2012, Microvirga sp. WSM3557, Rhizobiales bacterium WSM3557, strain WSM3557
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