STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIM27948.1Hypothetical protein. (92 aa)    
Predicted Functional Partners:
tolB
Tol-pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 0.811
EIM26073.1
Periplasmic component of the Tol biopolymer transport system; PFAM: WD40-like Beta Propeller Repeat; Hemolysin-type calcium-binding repeat (2 copies).
  
 0.811
EIM26945.1
Ca2+-binding protein, RTX toxin; PFAM: Hemolysin-type calcium-binding repeat (2 copies).
    
 0.716
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.694
guaB
Inosine-5''-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 0.670
EIM28073.1
PFAM: Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome c; TIGRFAM: cytochrome c oxidase, subunit II.
     
 0.661
EIM27166.1
Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
   
 
  0.654
EIM27167.1
Heme/copper-type cytochrome/quinol oxidase, subunit 3; PFAM: Cytochrome c oxidase subunit III.
   
 
  0.654
EIM27947.1
PFAM: DnaJ domain; Tellurite resistance protein TerB.
   
   0.619
EIM27946.1
Negative regulator of beta-lactamase expression; PFAM: Putative peptidoglycan binding domain; N-acetylmuramoyl-L-alanine amidase.
     
 0.586
Your Current Organism:
Microvirga lotononidis
NCBI taxonomy Id: 864069
Other names: HAMBI 3237, LMG 26455, LMG:26455, M. lotononidis, Microvirga lotononidis Ardley et al. 2012, Microvirga sp. WSM3557, Rhizobiales bacterium WSM3557, strain WSM3557
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