STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIM27994.1Uncharacterized protein involved in outer membrane biogenesis; PFAM: AsmA family. (1187 aa)    
Predicted Functional Partners:
EIM31098.1
Hypothetical protein.
  
     0.767
EIM27390.1
TIGRFAM: TolA protein.
  
     0.763
EIM30964.1
Hypothetical protein.
  
     0.762
EIM31079.1
Hypothetical protein.
  
     0.757
EIM28498.1
Hypothetical protein.
  
     0.752
EIM29575.1
PFAM: Uncharacterized protein conserved in bacteria (DUF2125).
  
     0.744
EIM27708.1
Hypothetical protein.
  
     0.738
EIM24752.1
PFAM: BA14K-like protein.
  
     0.710
EIM29607.1
PFAM: Predicted membrane protein (DUF2232).
  
     0.706
EIM30457.1
PFAM: ParB-like nuclease domain.
  
     0.702
Your Current Organism:
Microvirga lotononidis
NCBI taxonomy Id: 864069
Other names: HAMBI 3237, LMG 26455, LMG:26455, M. lotononidis, Microvirga lotononidis Ardley et al. 2012, Microvirga sp. WSM3557, Rhizobiales bacterium WSM3557, strain WSM3557
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