STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIM28282.1Putative acetyltransferase. (112 aa)    
Predicted Functional Partners:
nadE-2
NAD synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
 
  
  0.752
EIM27620.1
Putative stress protein (general stress protein 26); PFAM: Pyridoxamine 5'-phosphate oxidase.
  
    0.739
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
  0.660
EIM29927.1
PFAM: DeoC/LacD family aldolase.
   
    0.655
rpiA
Ribose 5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
  
    0.625
EIM30786.1
Hypothetical protein; PFAM: CsbD-like; Belongs to the UPF0337 (CsbD) family.
   
    0.572
EIM30848.1
PFAM: CsbD-like; Belongs to the UPF0337 (CsbD) family.
   
    0.572
EIM27616.1
Hypothetical protein; PFAM: CsbD-like; Belongs to the UPF0337 (CsbD) family.
   
    0.572
ftsH-2
ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
       0.543
EIM28281.1
Acetyltransferase, ribosomal protein N-acetylase; PFAM: Acetyltransferase (GNAT) family.
       0.535
Your Current Organism:
Microvirga lotononidis
NCBI taxonomy Id: 864069
Other names: HAMBI 3237, LMG 26455, LMG:26455, M. lotononidis, Microvirga lotononidis Ardley et al. 2012, Microvirga sp. WSM3557, Rhizobiales bacterium WSM3557, strain WSM3557
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