STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGK95410.1Hypothetical protein; Manually curated; non-canonical start codon. (94 aa)    
Predicted Functional Partners:
AGK95409.1
Hypothetical protein.
       0.786
AGK95408.1
Hypothetical protein.
       0.720
AGK95404.1
Hypothetical protein.
       0.690
AGK95405.1
Hypothetical protein.
       0.690
AGK95406.1
Hypothetical protein.
       0.690
AGK95407.1
Hypothetical protein.
       0.690
AGK95401.1
PFAM: Phage portal protein; TIGRFAM: phage portal protein, HK97 family.
       0.668
AGK95402.1
Protease subunit of ATP-dependent protease; PFAM: Clp protease; Belongs to the peptidase S14 family.
       0.668
AGK95403.1
PFAM: Phage capsid family.
       0.668
AGK95411.1
PFAM: Phage-related minor tail protein.
       0.668
Your Current Organism:
Clostridium pasteurianum
NCBI taxonomy Id: 86416
Other names: C. pasteurianum BC1, Clostridia isolate BC1, Clostridium pasteurianum BC1, Clostridium pasteurianum str. BC1, Clostridium pasteurianum strain BC1, Clostridium sp. ATCC 53464, Clostridium sp. BC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.