STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGK95755.1Phosphotransferase system, galactitol-specific IIC component; PFAM: PTS system sugar-specific permease component. (461 aa)    
Predicted Functional Partners:
AGK95754.1
Phosphotransferase system, galactitol-specific IIB component; PFAM: PTS system, Lactose/Cellobiose specific IIB subunit.
 
 
 0.995
AGK95753.1
PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
 
 
 0.993
AGK98540.1
PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
 
 
 0.988
AGK98539.1
Phosphotransferase system, galactitol-specific IIB component; PFAM: PTS system, Lactose/Cellobiose specific IIB subunit.
 
 
 0.987
AGK98538.1
Phosphotransferase system, galactitol-specific IIC component; PFAM: PTS system sugar-specific permease component.
  
  
 
0.915
AGK97467.1
PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family.
    
 0.906
AGK95751.1
Transcriptional antiterminator; PFAM: PTS system fructose IIA component; Sigma-54 interaction domain; PRD domain; Sigma-54, DNA binding domain; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
 
  
 0.870
AGK95752.1
PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase.
 
    0.753
AGK99522.1
1-phosphofructokinase; PFAM: pfkB family carbohydrate kinase; TIGRFAM: 1-phosphofructokinase; hexose kinase, 1-phosphofructokinase family; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
  
  
 0.739
AGK96380.1
PFAM: PTS system enzyme II sorbitol-specific factor; TIGRFAM: PTS system, glucitol/sorbitol-specific, IIC component.
 
  
 0.733
Your Current Organism:
Clostridium pasteurianum
NCBI taxonomy Id: 86416
Other names: C. pasteurianum BC1, Clostridia isolate BC1, Clostridium pasteurianum BC1, Clostridium pasteurianum str. BC1, Clostridium pasteurianum strain BC1, Clostridium sp. ATCC 53464, Clostridium sp. BC1
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