Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGK96862.1PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain. (471 aa)    
Predicted Functional Partners:
AGK99131.1
CheY-like receiver domain-containing protein; PFAM: Response regulator receiver domain.
 
 
 0.925
AGK96861.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
 
 0.911
AGK99005.1
PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; GAF domain; His Kinase A (phosphoacceptor) domain.
  
 
 0.865
AGK98937.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
 
 0.838
AGK96867.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
 
 0.836
AGK97293.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB.
 
 0.797
AGK98441.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
 
 0.796
AGK95989.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
   0.783
AGK96251.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
 
 0.781
AGK96257.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
 
 0.780
Your Current Organism:
Clostridium pasteurianum
NCBI taxonomy Id: 86416
Other names: C. pasteurianum BC1, Clostridia isolate BC1, Clostridium pasteurianum BC1, Clostridium pasteurianum str. BC1, Clostridium pasteurianum strain BC1, Clostridium sp. ATCC 53464, Clostridium sp. BC1
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