Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGK97212.1 | AGK97213.1 | Clopa_2348 | Clopa_2349 | Hypothetical protein. | Acetyltransferase, ribosomal protein N-acetylase; PFAM: Acetyltransferase (GNAT) family. | 0.401 |
AGK97212.1 | AGK97214.1 | Clopa_2348 | Clopa_2350 | Hypothetical protein. | Hypothetical protein. | 0.401 |
AGK97213.1 | AGK97212.1 | Clopa_2349 | Clopa_2348 | Acetyltransferase, ribosomal protein N-acetylase; PFAM: Acetyltransferase (GNAT) family. | Hypothetical protein. | 0.401 |
AGK97213.1 | AGK97214.1 | Clopa_2349 | Clopa_2350 | Acetyltransferase, ribosomal protein N-acetylase; PFAM: Acetyltransferase (GNAT) family. | Hypothetical protein. | 0.773 |
AGK97213.1 | dcd | Clopa_2349 | Clopa_2351 | Acetyltransferase, ribosomal protein N-acetylase; PFAM: Acetyltransferase (GNAT) family. | Deoxycytidine triphosphate deaminase; Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate. | 0.437 |
AGK97214.1 | AGK97212.1 | Clopa_2350 | Clopa_2348 | Hypothetical protein. | Hypothetical protein. | 0.401 |
AGK97214.1 | AGK97213.1 | Clopa_2350 | Clopa_2349 | Hypothetical protein. | Acetyltransferase, ribosomal protein N-acetylase; PFAM: Acetyltransferase (GNAT) family. | 0.773 |
AGK97214.1 | dcd | Clopa_2350 | Clopa_2351 | Hypothetical protein. | Deoxycytidine triphosphate deaminase; Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate. | 0.427 |
dcd | AGK97213.1 | Clopa_2351 | Clopa_2349 | Deoxycytidine triphosphate deaminase; Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate. | Acetyltransferase, ribosomal protein N-acetylase; PFAM: Acetyltransferase (GNAT) family. | 0.437 |
dcd | AGK97214.1 | Clopa_2351 | Clopa_2350 | Deoxycytidine triphosphate deaminase; Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate. | Hypothetical protein. | 0.427 |