Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGK98040.1PFAM: Prismane/CO dehydrogenase family; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit. (624 aa)    
Predicted Functional Partners:
AGK96001.1
Fe-S-cluster-containing hydrogenase subunit; PFAM: 4Fe-4S binding domain.
 
  
 0.918
AGK96002.1
Fe-S-cluster-containing hydrogenase subunit; PFAM: 4Fe-4S binding domain.
 
  
 0.916
AGK95998.1
Formate dehydrogenase, alpha subunit, archaeal-type; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, archaeal-type; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
 0.910
AGK97008.1
CO dehydrogenase maturation factor; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
 
   
 0.798
AGK96437.1
CO dehydrogenase maturation factor; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
 
   
 0.796
AGK98039.1
NAD(P)H-nitrite reductase; PFAM: BFD-like [2Fe-2S] binding domain.
  
  
 0.738
AGK96040.1
Putative flavoprotein; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Flavodoxin; Metallo-beta-lactamase superfamily.
 
  
 0.711
AGK97009.1
PFAM: Predicted RNA-binding protein.
  
     0.656
AGK97010.1
Hypothetical protein.
  
     0.599
AGK98041.1
PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein.
     
 0.558
Your Current Organism:
Clostridium pasteurianum
NCBI taxonomy Id: 86416
Other names: C. pasteurianum BC1, Clostridia isolate BC1, Clostridium pasteurianum BC1, Clostridium pasteurianum str. BC1, Clostridium pasteurianum strain BC1, Clostridium sp. ATCC 53464, Clostridium sp. BC1
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