Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGK98317.1Ig-like domain-containing surface protein; PFAM: Bacterial Ig-like domain (group 2); Leucine Rich Repeat. (457 aa)    
Predicted Functional Partners:
AGK97459.1
DNA segregation ATPase, FtsK/SpoIIIE family; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family; Belongs to the FtsK/SpoIIIE/SftA family.
   
 
 0.653
AGK98779.1
Thioredoxin domain protein; PFAM: Protein of unknown function, DUF255; Glycosyl hydrolase family 76.
    
   0.610
AGK96292.1
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: AMP-binding enzyme.
  
 
 0.607
AGK99005.1
PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; GAF domain; His Kinase A (phosphoacceptor) domain.
 
 
 
 0.576
AGK95413.1
Hypothetical protein.
  
 
 0.507
AGK96291.1
Polyketide synthase family protein; PFAM: Phosphopantetheine attachment site; Acyl transferase domain; KR domain; Beta-ketoacyl synthase, N-terminal domain; AMP-binding enzyme; Beta-ketoacyl synthase, C-terminal domain.
 
 
 0.477
AGK98373.1
C-terminal processing peptidase; PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc); Belongs to the peptidase S41A family.
  
 
 0.461
AGK95635.1
Hypothetical protein.
    
 
 0.449
AGK95892.1
PFAM: Heparinase II/III-like protein.
  
 
 0.445
AGK98316.1
TIGRFAM: putative beta-lysine N-acetyltransferase.
       0.432
Your Current Organism:
Clostridium pasteurianum
NCBI taxonomy Id: 86416
Other names: C. pasteurianum BC1, Clostridia isolate BC1, Clostridium pasteurianum BC1, Clostridium pasteurianum str. BC1, Clostridium pasteurianum strain BC1, Clostridium sp. ATCC 53464, Clostridium sp. BC1
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