STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGK99395.1Nitrogenase molybdenum-iron protein, alpha and beta chains; PFAM: Nitrogenase component 1 type Oxidoreductase. (493 aa)    
Predicted Functional Partners:
AGK99394.1
Nitrogenase molybdenum-iron protein, alpha and beta chains; PFAM: Nitrogenase component 1 type Oxidoreductase.
 
 
0.922
AGK97006.1
Nitrogenase molybdenum-iron protein, alpha and beta chains; PFAM: Nitrogenase component 1 type Oxidoreductase.
 
 
 0.888
AGK98262.1
PFAM: Vanadium/alternative nitrogenase delta subunit; TIGRFAM: V-containing nitrogenase, delta subunit.
  
 
 
 0.839
AGK97528.1
PFAM: Dinitrogenase iron-molybdenum cofactor.
 
  
 0.796
AGK98909.1
Hypothetical protein; PFAM: Dinitrogenase iron-molybdenum cofactor.
 
  
 0.792
AGK98908.1
Hypothetical protein; PFAM: Dinitrogenase iron-molybdenum cofactor.
 
  
 0.770
AGK98920.1
Putative Fe-S oxidoreductase; PFAM: Radical SAM superfamily; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB.
 
  
 0.712
AGK98501.1
Hypothetical protein.
  
     0.675
AGK96033.1
Nitrogenase molybdenum-iron protein, alpha and beta chains; PFAM: Nitrogenase component 1 type Oxidoreductase.
 
 
0.669
AGK96034.1
Nitrogenase molybdenum-iron protein, alpha and beta chains; PFAM: Nitrogenase component 1 type Oxidoreductase.
 
 
0.669
Your Current Organism:
Clostridium pasteurianum
NCBI taxonomy Id: 86416
Other names: C. pasteurianum BC1, Clostridia isolate BC1, Clostridium pasteurianum BC1, Clostridium pasteurianum str. BC1, Clostridium pasteurianum strain BC1, Clostridium sp. ATCC 53464, Clostridium sp. BC1
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