Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGK99475.1Multidrug resistance efflux pump; PFAM: HlyD family secretion protein. (281 aa)    
Predicted Functional Partners:
AGK99477.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
 
   
 0.849
AGK99476.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.836
AGK99005.1
PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; GAF domain; His Kinase A (phosphoacceptor) domain.
 
  
 0.622
AGK96028.1
Hypothetical protein.
 
  
 0.579
AGK95358.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
 
  
 0.563
AGK99137.1
ABC-type antimicrobial peptide transport system, permease component; PFAM: Predicted permease.
 
  
 0.563
AGK99501.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
 
  
 0.561
AGK99379.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
  
  
 0.500
AGK96292.1
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: AMP-binding enzyme.
  
  
 0.460
AGK95991.1
Hypothetical protein.
   
    0.443
Your Current Organism:
Clostridium pasteurianum
NCBI taxonomy Id: 86416
Other names: C. pasteurianum BC1, Clostridia isolate BC1, Clostridium pasteurianum BC1, Clostridium pasteurianum str. BC1, Clostridium pasteurianum strain BC1, Clostridium sp. ATCC 53464, Clostridium sp. BC1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.