node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGK97188.1 | AGK98413.1 | Clopa_2324 | Clopa_3631 | PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit. | Protein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.947 |
AGK97188.1 | AGK99582.1 | Clopa_2324 | Clopa_4908 | PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit. | Preprotein translocase subunit YidC; PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain. | 0.931 |
AGK97188.1 | ffh | Clopa_2324 | Clopa_2480 | PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit. | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.934 |
AGK97188.1 | ftsY | Clopa_2324 | Clopa_2478 | PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit. | Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). | 0.936 |
AGK97188.1 | secA | Clopa_2324 | Clopa_4358 | PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit. | Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. | 0.948 |
AGK97188.1 | secE | Clopa_2324 | Clopa_4527 | PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit. | Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | 0.963 |
AGK97188.1 | secY | Clopa_2324 | Clopa_4492 | PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit. | Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.955 |
AGK98413.1 | AGK97188.1 | Clopa_3631 | Clopa_2324 | Protein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit. | 0.947 |
AGK98413.1 | AGK99582.1 | Clopa_3631 | Clopa_4908 | Protein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Preprotein translocase subunit YidC; PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain. | 0.978 |
AGK98413.1 | ffh | Clopa_3631 | Clopa_2480 | Protein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.974 |
AGK98413.1 | ftsY | Clopa_3631 | Clopa_2478 | Protein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). | 0.980 |
AGK98413.1 | rnpA | Clopa_3631 | Clopa_4910 | Protein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.590 |
AGK98413.1 | secA | Clopa_3631 | Clopa_4358 | Protein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. | 0.982 |
AGK98413.1 | secE | Clopa_3631 | Clopa_4527 | Protein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | 0.997 |
AGK98413.1 | secY | Clopa_3631 | Clopa_4492 | Protein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.993 |
AGK99581.1 | AGK99582.1 | Clopa_4907 | Clopa_4908 | Putative RNA-binding protein; PFAM: R3H domain. | Preprotein translocase subunit YidC; PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain. | 0.943 |
AGK99581.1 | AGK99583.1 | Clopa_4907 | Clopa_4909 | Putative RNA-binding protein; PFAM: R3H domain. | Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | 0.897 |
AGK99581.1 | rnpA | Clopa_4907 | Clopa_4910 | Putative RNA-binding protein; PFAM: R3H domain. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.945 |
AGK99582.1 | AGK97188.1 | Clopa_4908 | Clopa_2324 | Preprotein translocase subunit YidC; PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain. | PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit. | 0.931 |
AGK99582.1 | AGK98413.1 | Clopa_4908 | Clopa_3631 | Preprotein translocase subunit YidC; PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain. | Protein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.978 |