STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFM39435.1Hypothetical protein. (135 aa)    
Predicted Functional Partners:
EFM39111.1
Heptaprenyl diphosphate synthase component I; Pfam: PF07456; InterPro: IPR010898.
 
    0.805
ctpA
Peptidase, S41 family; COG: COG0793; Pfam: PF00595,PF03572; InterPro: IPR004447; Belongs to the peptidase S41A family.
       0.779
ftsE
Putative cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
       0.773
ftsX
Efflux ABC transporter, permease protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
       0.773
EFM39433.1
Peptidase, M23 family; COG: COG0739; Pfam: PF01551; InterPro: IPR002886.
       0.773
fliS2
Putative flagellar protein FliS; InterPro: IPR003713.
  
     0.767
EFM39050.1
Hypothetical protein.
  
     0.758
EFM38807.1
Hypothetical protein.
  
     0.756
EFM39265.1
Putative zinc ribbon domain protein; Pfam: PF02591.
  
     0.754
EFM38615.1
Hypothetical protein.
  
     0.745
Your Current Organism:
Eubacterium yurii
NCBI taxonomy Id: 864565
Other names: Eubacterium yurii subsp. margaretiae ATCC 43715, Eubacterium yurii subsp. margaretiae str. ATCC 43715, Eubacterium yurii subsp. margaretiae strain ATCC 43715, [. yurii subsp. margaretiae ATCC 43715, [Eubacterium] yurii subsp. margaretiae ATCC 43715
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.