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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gmhBD,D-heptose 1,7-bisphosphate phosphatase; Pfam: PF00483; InterPro: IPR006543. (429 aa)    
Predicted Functional Partners:
EFM39167.1
GHMP kinase, N-terminal domain protein; COG: COG2605; Pfam: PF00288,PF08544; InterPro: IPR014721.
 
 
 0.999
gmhA
SIS domain protein; COG: COG0279; InterPro: IPR004515.
 
 0.998
EFM39166.1
NAD dependent epimerase/dehydratase family protein; COG: COG0451; Pfam: PF01370; InterPro: IPR001509.
 
 0.994
EFM39143.1
Elongation factor Tu GTP binding domain protein; COG: COG3276; Pfam: PF00009,PF03144,PF09107; InterPro: IPR000795.
    
 0.994
EFM39165.1
Hypothetical protein; Pfam: PF01370; InterPro: IPR016040; 1.1.1.271.
  
 0.993
wcbK
Putative GDP-mannose 4,6-dehydratase; COG: COG1089; Pfam: PF01370; InterPro: IPR006368.
 
  
 0.989
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
 0.966
csaB
Polysaccharide pyruvyl transferase CsaB; COG: COG2327; Pfam: PF04230; InterPro: IPR007345.
  
 0.947
rfbA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
 
 0.947
rfbB
dTDP-glucose 4,6-dehydratase; COG: COG1088; Pfam: PF01370; InterPro: IPR005888; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.946
Your Current Organism:
Eubacterium yurii
NCBI taxonomy Id: 864565
Other names: Eubacterium yurii subsp. margaretiae ATCC 43715, Eubacterium yurii subsp. margaretiae str. ATCC 43715, Eubacterium yurii subsp. margaretiae strain ATCC 43715, [. yurii subsp. margaretiae ATCC 43715, [Eubacterium] yurii subsp. margaretiae ATCC 43715
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