Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
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[Homology]
Score
EFM39009.1Hypothetical protein. (198 aa)    
Predicted Functional Partners:
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
       0.773
mreB
Cell shape determining protein, MreB/Mrl family; COG: COG1077; Pfam: PF06723; InterPro: IPR004753.
       0.587
lytB
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; Pfam: PF01832.
       0.554
Your Current Organism:
Eubacterium yurii
NCBI taxonomy Id: 864565
Other names: Eubacterium yurii subsp. margaretiae ATCC 43715, Eubacterium yurii subsp. margaretiae str. ATCC 43715, Eubacterium yurii subsp. margaretiae strain ATCC 43715, [. yurii subsp. margaretiae ATCC 43715, [Eubacterium] yurii subsp. margaretiae ATCC 43715
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