STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKQ70011.1IMG reference gene:2510093939; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (475 aa)    
Predicted Functional Partners:
EKQ70010.1
Cation/multidrug efflux pump; IMG reference gene:2510093938; PFAM: AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.967
EKQ70236.1
Outer membrane protein; IMG reference gene:2510094181; PFAM: Outer membrane efflux protein.
 
 0.911
EKQ70878.1
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter; IMG reference gene:2510094853; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.853
EKQ69090.1
Cation/multidrug efflux pump; IMG reference gene:2510095369; PFAM: AcrB/AcrD/AcrF family.
 
 0.828
EKQ67088.1
Phosphotransferase system HPr (HPr) family protein; IMG reference gene:2510098578; PFAM: PEP-utilising enzyme, TIM barrel domain; phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1; PEP-utilising enzyme, mobile domain; PTS HPr component phosphorylation site; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; Phosphotransferase System HPr (HPr) Family; PTS system, glucose subfamily, IIA component.
   
 
  0.709
EKQ67089.1
PTS system protein D-glucose-specific IIC component, Glc family (TC 4.A.1.1.1);PTS system D-glucose-specific IIB component, Glc family (TC 4.A.1.1.1); IMG reference gene:2510098579; PFAM: Phosphotransferase system, EIIC; phosphotransferase system, EIIB; TIGRFAM: PTS system, glucose-like IIB component; PTS system, glucose-specific IIBC component.
     
 0.653
EKQ71123.1
ABC-type antimicrobial peptide transport system, permease component; IMG reference gene:2510095118; PFAM: Predicted permease.
 
 
 0.627
EKQ68122.1
ABC-type antimicrobial peptide transport system, permease component; IMG reference gene:2510096306; PFAM: Predicted permease.
 
 
 0.611
EKQ70990.1
ABC-type antimicrobial peptide transport system, permease component; IMG reference gene:2510094970; PFAM: Predicted permease.
 
 
 0.607
EKQ66715.1
DevC protein; IMG reference gene:2510098175; PFAM: Predicted permease; TIGRFAM: DevC protein.
  
 
 0.548
Your Current Organism:
Oscillatoriales cyanobacterium JSC12
NCBI taxonomy Id: 864702
Other names: O. cyanobacterium JSC-12, Oscillatoriales cyanobacterium JSC-12
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