STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKQ69859.1ABC-type proline/glycine betaine transport system, ATPase component; IMG reference gene:2510096174; PFAM: ABC transporter. (254 aa)    
Predicted Functional Partners:
EKQ69860.1
ABC-type proline/glycine betaine transport system, permease component; IMG reference gene:2510096175; PFAM: Binding-protein-dependent transport system inner membrane component.
 0.999
EKQ69528.1
Osmoprotectant binding protein; IMG reference gene:2510095826; PFAM: Substrate binding domain of ABC-type glycine betaine transport system.
 
 0.996
EKQ66581.1
ABC-type multidrug transport system, permease component; IMG reference gene:2510098735.
 
      0.585
EKQ66580.1
ABC-type multidrug transport system, permease component; IMG reference gene:2510098734.
 
      0.565
EKQ70843.1
ABC-type spermidine/putrescine transport system, ATPase component; IMG reference gene:2510094817; PFAM: ABC transporter; TOBE domain.
  
  
 
0.501
potA
Spermidine/putrescine ABC transporter ATP-binding subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
  
  
 
0.496
EKQ69858.1
Hypothetical protein; IMG reference gene:2510096173.
       0.493
EKQ68574.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; IMG reference gene:2510096780; PFAM: ABC transporter; TOBE domain.
  
  
 
0.493
EKQ69846.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; IMG reference gene:2510096160; PFAM: ABC transporter; TOBE domain.
  
  
 
0.488
EKQ71123.1
ABC-type antimicrobial peptide transport system, permease component; IMG reference gene:2510095118; PFAM: Predicted permease.
 
      0.446
Your Current Organism:
Oscillatoriales cyanobacterium JSC12
NCBI taxonomy Id: 864702
Other names: O. cyanobacterium JSC-12, Oscillatoriales cyanobacterium JSC-12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.