STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ04246.1Phosphoesterase PA-phosphatase related protein; PFAM: PAP2 superfamily; InterPro IPR000326; KEGG: gfo:GFO_1226 PAP2 superfamily membrane protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase; SPTR: PAP2 family protein. (248 aa)    
Predicted Functional Partners:
EHQ03780.1
PFAM: AMP-binding enzyme; COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; KEGG: gfo:GFO_2306 O-succinylbenzoyl-CoA synthetase; SPTR: O-succinylbenzoyl-CoA synthetase.
    
 0.720
EHQ04070.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: zpr:ZPR_2448 SusD/RagB family protein; PFAM: RagB/SusD; SPTR: SusD/RagB family protein.
    
 
 0.693
EHQ03295.1
PFAM: Cytochrome P450; COGs: COG2124 Cytochrome P450; InterPro IPR001128; KEGG: gfo:GFO_0170 cytochrome P450; PFAM: Cytochrome P450; SPTR: Cytochrome P450.
   
  0.690
rplF
LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.671
EHQ01605.1
PFAM: Pyridoxal-dependent decarboxylase conserved domain; COGs: COG0076 Glutamate decarboxylase and related PLP-dependent protein; InterPro IPR002129; KEGG: gfo:GFO_2231 L-2,4-diaminobutyrate decarboxylase; PFAM: Pyridoxal phosphate-dependent decarboxylase; SPTR: L-2,4-diaminobutyrate decarboxylase.
    
 0.641
EHQ03677.1
Hypothetical protein; PFAM: RNA polymerase Rpb6; KEGG: cat:CA2559_09448 hypothetical protein; SPTR: Putative uncharacterized protein.
    
   0.603
EHQ03484.1
PFAM: Fatty acid hydroxylase superfamily; InterPro IPR006694; KEGG: gfo:GFO_2501 gamma-carotene hydroxylase; PFAM: Fatty acid hydroxylase; SPTR: Gamma-carotene hydroxylase.
    
  0.563
EHQ03918.1
PFAM: Fatty acid hydroxylase superfamily; COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: zpr:ZPR_1995 sterol desaturase family protein; PFAM: Fatty acid hydroxylase; SPTR: Sterol desaturase family protein.
    
  0.563
EHQ03944.1
PFAM: Fatty acid hydroxylase superfamily; COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: cat:CA2559_06935 hypothetical protein; PFAM: Fatty acid hydroxylase; SPTR: Sterol desaturase-related protein.
    
  0.563
EHQ04247.1
Hypothetical protein.
       0.539
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.