STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ04313.1PFAM: NADP oxidoreductase coenzyme F420-dependent; Domain of unknown function (DUF2520); COGs: COG5495 conserved hypothetical protein; InterPro IPR018931; KEGG: gfo:GFO_1810 hypothetical protein; PFAM: Domain of unknown function DUF2520; SPTR: Putative uncharacterized protein. (253 aa)    
Predicted Functional Partners:
EHQ04314.1
PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; HAD-superfamily hydrolase, subfamily IIIA; COGs: COG1778 Low specificity phosphatase (HAD superfamily); InterPro IPR010023:IPR006549; KEGG: gfo:GFO_1811 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; SPTR: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; TIGRFAM: Phosphatase KdsC; HAD-superfamily hydrolase, subfamily IIIA.
      0.946
EHQ04317.1
Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
 
     0.835
EHQ04315.1
PFAM: Small Multidrug Resistance protein; COGs: COG2076 Membrane transporter of cations and cationic drugs; InterPro IPR000390; KEGG: chu:CHU_0285 integral membrane protein; PFAM: Small multidrug resistance protein; SPTR: Integral membrane protein.
       0.773
panC
Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
 
  
 0.768
EHQ04316.1
PFAM: UbiA prenyltransferase family; InterPro IPR000537; KEGG: gfo:GFO_1812 prenyltransferase; PFAM: UbiA prenyltransferase; SPTR: UbiA family prenyltransferase.
       0.764
panB
Ketopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.
 
  
 0.693
EHQ04318.1
KEGG: gfo:GFO_1814 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.610
EHQ04319.1
PFAM: Mechanosensitive ion channel; InterPro IPR006685; KEGG: gfo:GFO_1815 small-conductance mechanosensitive ion channel protein; PFAM: Mechanosensitive ion channel MscS; SPTR: Small-conductance mechanosensitive ion channel protein.
       0.605
EHQ04312.1
PFAM: ResB-like family; Cytochrome C assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB; COGs: COG0755 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR002541; KEGG: gfo:GFO_1809 cytochrome c assembly protein family membrane protein; PFAM: Cytochrome c assembly protein; SPTR: Cytochrome c assembly protein family membrane protein.
       0.566
EHQ01334.1
Hypothetical protein; PFAM: BadF/BadG/BcrA/BcrD ATPase family; COGs: COG2971 N-acetylglucosamine kinase; KEGG: gfo:GFO_2129 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.534
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.