STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ01144.1PFAM: Family of unknown function (DUF490); InterPro IPR007452; KEGG: zpr:ZPR_2082 hypothetical protein; PFAM: Protein of unknown function DUF490; SPTR: Putative uncharacterized protein. (1658 aa)    
Predicted Functional Partners:
EHQ01145.1
PFAM: Surface antigen; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR000184; KEGG: zpr:ZPR_2083 surface antigen protein; PFAM: Bacterial surface antigen (D15); SPTR: Surface antigen protein.
 
   
 0.944
EHQ04479.1
KEGG: gfo:GFO_2179 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.614
EHQ03832.1
KEGG: gfo:GFO_2212 secreted protein; SPTR: Secreted protein.
  
     0.594
EHQ02729.1
PFAM: Protein of unknown function (DUF1469); KEGG: gfo:GFO_3305 membrane protein; SPTR: Membrane protein.
  
     0.587
EHQ01113.1
PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN); COGs: COG1295 membrane protein; InterPro IPR004664; KEGG: gfo:GFO_1489 ribonuclease BN-like family protein; PFAM: Ribonuclease BN-related; SPTR: Ribonuclease BN-like family protein.
 
     0.535
EHQ02195.1
PFAM: Domain of unknown function DUF20; COGs: COG0628 permease; InterPro IPR002549; KEGG: gfo:GFO_2793 membrane protein, UPF0118; PFAM: Uncharacterised protein family UPF0118; SPTR: Membrane protein, UPF0118.
  
     0.502
EHQ04451.1
Protein of unknown function DUF2254, membrane; PFAM: Predicted membrane protein (DUF2254); COGs: COG4325 membrane protein; InterPro IPR018723; KEGG: gfo:GFO_2295 hypothetical protein; PFAM: Protein of unknown function DUF2254, membrane; SPTR: Putative uncharacterized protein.
  
     0.470
EHQ03831.1
PFAM: GH3 auxin-responsive promoter; InterPro IPR004993; KEGG: gfo:GFO_2213 hypothetical protein; PFAM: GH3 auxin-responsive promoter; SPTR: Putative uncharacterized protein.
  
     0.413
EHQ03279.1
Hypothetical protein; PFAM: Domain of Unknown Function (DUF748); KEGG: gfo:GFO_0154 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.403
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.