STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ01155.1PFAM: Cupin domain; InterPro IPR013096; KEGG: tbd:Tbd_2659 hypothetical protein; PFAM: Cupin 2, conserved barrel; SPTR: Putative uncharacterized protein. (152 aa)    
Predicted Functional Partners:
EHQ04004.1
Catalase related subgroup domain-containing protein; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 
  0.716
EHQ01153.1
Transcriptional repressor, CopY family; PFAM: Penicillinase repressor; COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: zpr:ZPR_2079 antibiotic resistance-related regulatory protein; PFAM: Penicillinase repressor; SPTR: Putative antibiotic resistance-related regulatory protein.
       0.519
EHQ01154.1
Cell wall hydrolase/autolysin; PFAM: BlaR1 peptidase M56; N-acetylmuramoyl-L-alanine amidase; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508:IPR008756; KEGG: zpr:ZPR_2080 hypothetical protein; PFAM: Cell wall hydrolase/autolysin, catalytic; Peptidase M56, BlaR1; SMART: Cell wall hydrolase/autolysin, catalytic; SPTR: Conserved hypothetical transmembrane protein.
       0.519
EHQ01156.1
Putative transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: gfo:GFO_0040 cyclic nucleotide-binding domain-containing protein; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; SPTR: Protein containing cyclic nucleotide-binding domain.
       0.511
EHQ02376.1
PFAM: Mannose-6-phosphate isomerase; COGs: COG0662 Mannose-6-phosphate isomerase; InterPro IPR001538; KEGG: wvi:Weevi_0965 mannose-6-phosphate isomerase type II; PFAM: Mannose-6-phosphate isomerase, type II, C-terminal; SPTR: Mannose-6-phosphate isomerase.
  
  0.493
nbaC
3-hydroxyanthranilate 3,4-dioxygenase; Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate; Belongs to the 3-HAO family.
  
  0.493
EHQ02994.1
PFAM: Cupin domain; InterPro IPR013096; KEGG: fbc:FB2170_04225 hypothetical protein; PFAM: Cupin 2, conserved barrel; SPTR: Putative uncharacterized protein.
  
  0.493
EHQ01158.1
ThiJ/PfpI domain-containing protein; PFAM: DJ-1/PfpI family; COGs: COG0693 Putative intracellular protease/amidase; InterPro IPR002818; KEGG: zpr:ZPR_2187 ThiJ/PfpI; PFAM: ThiJ/PfpI; SPTR: ThiJ/PfpI family protein.
    
  0.480
EHQ02006.1
RNA polymerase, sigma 70 subunit, RpoD subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
    
   0.470
EHQ04134.1
PFAM: Lyase; Adenylosuccinate lyase C-terminal; TIGRFAM: adenylosuccinate lyase; COGs: COG0015 Adenylosuccinate lyase; InterPro IPR000362:IPR013539:IPR004769; KEGG: cao:Celal_0053 adenylosuccinate lyase; PFAM: Adenylosuccinate lyase C-terminal; Fumarate lyase; SPTR: Adenylosuccinate lyase; TIGRFAM: Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
 0.454
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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