Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EHQ01501.1PFAM: DSBA-like thioredoxin domain; COGs: COG2761 dithiol-disulfide isomerase involved in polyketide biosynthesis; InterPro IPR001853; KEGG: zpr:ZPR_1443 dithiol-disulfide isomerase; PFAM: DSBA oxidoreductase; SPTR: Predicted dithiol-disulfide isomerase. (214 aa)    
Predicted Functional Partners:
EHQ01502.1
KEGG: fbc:FB2170_16981 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
EHQ04195.1
KEGG: cat:CA2559_08586 hypothetical protein; SPTR: Putative uncharacterized protein.
    
 0.651
EHQ04457.1
PFAM: NADPH-dependent FMN reductase; COGs: COG0431 flavoprotein; InterPro IPR005025; KEGG: gfo:GFO_2155 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase; SPTR: NADPH-dependent FMN reductase.
  
    0.529
EHQ04307.1
PFAM: ArsC family; TIGRFAM: arsenate reductase (glutaredoxin); COGs: COG1393 Arsenate reductase and related protein glutaredoxin family; InterPro IPR006660; KEGG: zpr:ZPR_2332 arsenate reductase; PFAM: Arsenate reductase-like; SPTR: Arsenate reductase; Belongs to the ArsC family.
    
   0.500
EHQ02830.1
PFAM: ArsC family; COGs: COG1393 Arsenate reductase and related protein glutaredoxin family; InterPro IPR006660; KEGG: gfo:GFO_3441 ArsC family protein; PFAM: Arsenate reductase-like; SPTR: ArsC family protein; Belongs to the ArsC family.
    
   0.500
EHQ03709.1
Arsenate reductase like protein; PFAM: ArsC family; InterPro IPR006660; KEGG: cao:Celal_2995 arsenate reductase like protein; PFAM: Arsenate reductase-like; SPTR: Arsenate reductase like protein; Belongs to the ArsC family.
    
   0.500
EHQ03268.1
Globin family protein; PFAM: Bacterial-like globin; COGs: COG2346 Truncated hemoglobins; KEGG: gfo:GFO_1422 globin family protein; SPTR: Bacterial-like globin family protein.
  
  
 0.496
EHQ01503.1
RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: fbc:FB2170_11446 putative RNA polymerase sigma factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: Putative RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; Belongs to the sigma-70 factor family. ECF subfamily.
       0.408
EHQ01504.1
KEGG: fbc:FB2170_11451 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.408
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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