STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ01645.1PFAM: Protein of unknown function (DUF819); COGs: COG5505 integral membrane protein; InterPro IPR008537; KEGG: gfo:GFO_2354 hypothetical protein; PFAM: Protein of unknown function DUF819; SPTR: Membrane protein containing DUF819. (421 aa)    
Predicted Functional Partners:
EHQ01646.1
KEGG: zpr:ZPR_1179 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.671
EHQ01644.1
Cof-like hydrolase; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB; COGs: COG0561 hydrolase of the HAD superfamily; InterPro IPR000150:IPR006379:IPR013200; KEGG: gfo:GFO_2353 haloacid dehalogenase-like hydrolase; PFAM: HAD superfamily hydrolase-like, type 3; SPTR: Haloacid dehalogenase-like hydrolase; TIGRFAM: Cof protein; HAD-superfamily hydrolase, subfamily IIB.
       0.469
EHQ01643.1
KEGG: gfo:GFO_2352 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.436
EHQ01642.1
KEGG: gfo:GFO_2351 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.431
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.