STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ01694.1PFAM: Endonuclease/Exonuclease/phosphatase family; COGs: COG3568 Metal-dependent hydrolase; InterPro IPR005135; KEGG: zpr:ZPR_3540 endonuclease/exonuclease/phosphatase family protein; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase family protein. (277 aa)    
Predicted Functional Partners:
EHQ01695.1
PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; InterPro IPR007886; KEGG: gfo:GFO_2567 lysine 2-oxoglutarate reductase; PFAM: Alanine dehydrogenase/PNT, N-terminal; SPTR: Lysine 2-oxoglutarate reductase; tmRNA as predicted by Rfam (RF00023), score 142.27.
       0.773
EHQ01796.1
PFAM: Phospholipase/Carboxylesterase; COGs: COG4099 peptidase; InterPro IPR003140; KEGG: gfo:GFO_0365 alpha/beta fold hydrolase; PFAM: Phospholipase/carboxylesterase; SPTR: Secreted alpha/beta fold hydrolase-possibly a phospholipase/carboxylesterase.
     0.765
EHQ01909.1
PFAM: Aminotransferase class-V; COGs: COG0520 Selenocysteine lyase; InterPro IPR000192; KEGG: zpr:ZPR_3672 class-V aminotransferase; PFAM: Aminotransferase, class V/Cysteine desulfurase; SPTR: Class-V aminotransferase.
    
   0.730
EHQ02538.1
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
    
   0.730
EHQ02879.1
PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase family protein, VC1184 subfamily; COGs: COG0520 Selenocysteine lyase; InterPro IPR000192; KEGG: zpr:ZPR_0344 cysteine desulfurase-like protein; PFAM: Aminotransferase, class V/Cysteine desulfurase; SPTR: Cysteine desulfurase-like protein.
    
   0.730
EHQ01285.1
Trehalose synthase; PFAM: Alpha amylase, catalytic domain; Phosphotransferase enzyme family; TIGRFAM: trehalose synthase-fused probable maltokinase; trehalose synthase; COGs: COG0366 Glycosidase; InterPro IPR012810:IPR012811:IPR006589:IPR006047; KEGG: rbi:RB2501_14859 trehalose synthase; PFAM: Glycosyl hydrolase, family 13, catalytic region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; SPTR: Trehalose synthase; TIGRFAM: Trehalose synthase/alpha-amylase, N-terminal; Trehalose synthase/probable maltokinase, C-terminal.
  
 
  0.727
EHQ02572.1
PFAM: Delta-aminolevulinic acid dehydratase; COGs: COG0113 Delta-aminolevulinic acid dehydratase; InterPro IPR001731; KEGG: gfo:GFO_3230 delta-aminolevulinic acid dehydratase; PFAM: Tetrapyrrole biosynthesis, porphobilinogen synthase; SPTR: Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
 
      0.673
EHQ02432.1
PFAM: Glycerophosphoryl diester phosphodiesterase family; COGs: COG0584 Glycerophosphoryl diester phosphodiesterase; InterPro IPR004129; KEGG: gfo:GFO_3635 glycerophosphoryl diester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase; SPTR: Glycerophosphoryl diester phosphodiesterase.
      0.596
EHQ01795.1
PFAM: F5/8 type C domain; Glycosyl hydrolases family 43; COGs: COG3507 Beta-xylosidase; InterPro IPR006710:IPR000421:IPR003961; KEGG: gfo:GFO_0366 fibronectin type III repeat-containing secreted glycoside hydrolase, family 43; PFAM: Coagulation factor 5/8 type, C-terminal; Glycoside hydrolase, family 43; Fibronectin, type III; SPTR: Fibronectin type III repeat domain containing secreted glycoside hydrolase, family 43.
 
     0.561
EHQ03527.1
PFAM: Carboxylesterase; COGs: COG0657 Esterase/lipase; InterPro IPR002018; KEGG: gfo:GFO_0370 secreted lipase/esterase; PFAM: Carboxylesterase, type B; SPTR: Secreted lipase/esterase.
 
     0.555
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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