STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ01754.1PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: mpl:Mpal_2183 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase group 1. (357 aa)    
Predicted Functional Partners:
EHQ01756.1
KEGG: ter:Tery_3753 methyltransferase type 11; SPTR: Glycosyl transferase family 2.
      0.941
EHQ01755.1
PFAM: NAD dependent epimerase/dehydratase family; COGs: COG1089 GDP-D-mannose dehydratase; InterPro IPR001509; KEGG: bpb:bpr_I0396 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Putative uncharacterized protein.
 
    0.899
EHQ01758.1
TIGRFAM: methyltransferase, FkbM family; KEGG: mmh:Mmah_0084 SAM-dependent methyltransferase; SPTR: Predicted protein.
      0.816
EHQ01757.1
KEGG: gfo:GFO_0548 nucleotide-diphospho-sugar transferase domain-containing protein; SPTR: Protein containing nucleotide-diphospho-sugar transferase domain.
 
    0.795
EHQ01759.1
PFAM: ABC transporter; COGs: COG1134 ABC-type polysaccharide/polyol phosphate transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: zpr:ZPR_1095 ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein.
 
   0.768
EHQ01396.1
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: ttm:Tthe_1179 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyltransferase, group 1 family protein; overlaps another CDS with the same product name.
  
     0.716
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
 
    0.695
EHQ01399.1
Hypothetical protein; PFAM: Glycosyl transferases group 1; KEGG: mtt:Ftrac_0586 glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; manually curated.
     0.643
EHQ02277.1
PFAM: Nucleotidyl transferase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; COGs: COG0836 Mannose-1-phosphate guanylyltransferase; InterPro IPR005835; KEGG: fbc:FB2170_17321 putative mannose-1-phosphate guanylyltransferase; PFAM: Nucleotidyl transferase; SPTR: Putative mannose-1-phosphate guanylyltransferase.
  
 
 0.603
EHQ02596.1
PFAM: Glycosyl transferase family 2; InterPro IPR001173; KEGG: sli:Slin_2465 glycosyl transferase family 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase family 2.
 
 
    0.596
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.