STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ01764.1Hypothetical protein; PFAM: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase; KEGG: fjo:Fjoh_0303 hypothetical protein; SPTR: Putative uncharacterized protein. (467 aa)    
Predicted Functional Partners:
EHQ03257.1
Cyanophycin synthetase; PFAM: RimK-like ATP-grasp domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: cyanophycin synthetase; COGs: COG0769 UDP-N-acetylmuramyl tripeptide synthase; InterPro IPR013651:IPR013221:IPR004101:IPR011810; KEGG: gfo:GFO_0745 cyanophycin synthetase; PFAM: Mur ligase, central; ATP-grasp fold, RimK-type; Mur ligase, C-terminal; SPTR: Cyanophycin synthetase; TIGRFAM: Cyanophycin synthetase.
  
 0.911
EHQ03258.1
Cyanophycin synthetase; PFAM: RimK-like ATP-grasp domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: cyanophycin synthetase; COGs: COG0769 UDP-N-acetylmuramyl tripeptide synthase; InterPro IPR013651:IPR013221:IPR004101:IPR011810; KEGG: gfo:GFO_0745 cyanophycin synthetase; PFAM: Mur ligase, central; ATP-grasp fold, RimK-type; Mur ligase, C-terminal; SPTR: Cyanophycin synthetase; TIGRFAM: Cyanophycin synthetase; manually curated.
  
 0.911
murD
UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
  
 
 0.839
EHQ01729.1
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: gfo:GFO_0580 glycosyl transferase, group 1; PFAM: Glycosyl transferase, group 1; SPTR: LPS biosynthesis protein.
 
  
  0.816
EHQ01738.1
PFAM: Glycosyl transferase family 2; InterPro IPR001173; KEGG: gfo:GFO_0567 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, family 2.
 
  
  0.812
murF
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
  
 
 0.810
EHQ01740.1
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: gfo:GFO_0565 glycosyl transferase, group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase, group 1.
 
  
  0.803
EHQ01732.1
PFAM: Glycosyl transferase family 2; COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: gfo:GFO_0577 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, family 2; overlaps another CDS with the same product name.
 
     0.798
EHQ01733.1
PFAM: Glycosyl transferase family 2; InterPro IPR001173; KEGG: gfo:GFO_0576 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, family 2; overlaps another CDS with the same product name.
 
     0.798
EHQ01766.1
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: gfo:GFO_0575 glycosyl transferase, group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyltransferase.
  
  
  0.792
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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