Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EHQ01805.1 | EHQ01806.1 | Gilli_1131 | Gilli_1132 | KEGG: gfo:GFO_0350 membrane protein; SPTR: Membrane protein. | PFAM: MazG nucleotide pyrophosphohydrolase domain; InterPro IPR004518; KEGG: fps:FP0242 hypothetical protein; PFAM: NTP pyrophosphohydrolase MazG, putative catalytic core; SPTR: MazG nucleotide pyrophosphohydrolase domain protein JojD. | 0.773 |
| EHQ01805.1 | EHQ01809.1 | Gilli_1131 | Gilli_1135 | KEGG: gfo:GFO_0350 membrane protein; SPTR: Membrane protein. | KEGG: gfo:GFO_0344 secreted protein; SPTR: Secreted protein. | 0.553 |
| EHQ01805.1 | aroA | Gilli_1131 | Gilli_1130 | KEGG: gfo:GFO_0350 membrane protein; SPTR: Membrane protein. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.649 |
| EHQ01805.1 | dtd | Gilli_1131 | Gilli_1133 | KEGG: gfo:GFO_0350 membrane protein; SPTR: Membrane protein. | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. | 0.773 |
| EHQ01805.1 | queA | Gilli_1131 | Gilli_1129 | KEGG: gfo:GFO_0350 membrane protein; SPTR: Membrane protein. | S-adenosylmethionine--tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.469 |
| EHQ01805.1 | rsgA | Gilli_1131 | Gilli_1134 | KEGG: gfo:GFO_0350 membrane protein; SPTR: Membrane protein. | Ribosome biogenesis GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.773 |
| EHQ01806.1 | EHQ01805.1 | Gilli_1132 | Gilli_1131 | PFAM: MazG nucleotide pyrophosphohydrolase domain; InterPro IPR004518; KEGG: fps:FP0242 hypothetical protein; PFAM: NTP pyrophosphohydrolase MazG, putative catalytic core; SPTR: MazG nucleotide pyrophosphohydrolase domain protein JojD. | KEGG: gfo:GFO_0350 membrane protein; SPTR: Membrane protein. | 0.773 |
| EHQ01806.1 | EHQ01809.1 | Gilli_1132 | Gilli_1135 | PFAM: MazG nucleotide pyrophosphohydrolase domain; InterPro IPR004518; KEGG: fps:FP0242 hypothetical protein; PFAM: NTP pyrophosphohydrolase MazG, putative catalytic core; SPTR: MazG nucleotide pyrophosphohydrolase domain protein JojD. | KEGG: gfo:GFO_0344 secreted protein; SPTR: Secreted protein. | 0.553 |
| EHQ01806.1 | aroA | Gilli_1132 | Gilli_1130 | PFAM: MazG nucleotide pyrophosphohydrolase domain; InterPro IPR004518; KEGG: fps:FP0242 hypothetical protein; PFAM: NTP pyrophosphohydrolase MazG, putative catalytic core; SPTR: MazG nucleotide pyrophosphohydrolase domain protein JojD. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.954 |
| EHQ01806.1 | dtd | Gilli_1132 | Gilli_1133 | PFAM: MazG nucleotide pyrophosphohydrolase domain; InterPro IPR004518; KEGG: fps:FP0242 hypothetical protein; PFAM: NTP pyrophosphohydrolase MazG, putative catalytic core; SPTR: MazG nucleotide pyrophosphohydrolase domain protein JojD. | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. | 0.808 |
| EHQ01806.1 | queA | Gilli_1132 | Gilli_1129 | PFAM: MazG nucleotide pyrophosphohydrolase domain; InterPro IPR004518; KEGG: fps:FP0242 hypothetical protein; PFAM: NTP pyrophosphohydrolase MazG, putative catalytic core; SPTR: MazG nucleotide pyrophosphohydrolase domain protein JojD. | S-adenosylmethionine--tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.528 |
| EHQ01806.1 | rsgA | Gilli_1132 | Gilli_1134 | PFAM: MazG nucleotide pyrophosphohydrolase domain; InterPro IPR004518; KEGG: fps:FP0242 hypothetical protein; PFAM: NTP pyrophosphohydrolase MazG, putative catalytic core; SPTR: MazG nucleotide pyrophosphohydrolase domain protein JojD. | Ribosome biogenesis GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.799 |
| EHQ01809.1 | EHQ01805.1 | Gilli_1135 | Gilli_1131 | KEGG: gfo:GFO_0344 secreted protein; SPTR: Secreted protein. | KEGG: gfo:GFO_0350 membrane protein; SPTR: Membrane protein. | 0.553 |
| EHQ01809.1 | EHQ01806.1 | Gilli_1135 | Gilli_1132 | KEGG: gfo:GFO_0344 secreted protein; SPTR: Secreted protein. | PFAM: MazG nucleotide pyrophosphohydrolase domain; InterPro IPR004518; KEGG: fps:FP0242 hypothetical protein; PFAM: NTP pyrophosphohydrolase MazG, putative catalytic core; SPTR: MazG nucleotide pyrophosphohydrolase domain protein JojD. | 0.553 |
| EHQ01809.1 | aroA | Gilli_1135 | Gilli_1130 | KEGG: gfo:GFO_0344 secreted protein; SPTR: Secreted protein. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.469 |
| EHQ01809.1 | dtd | Gilli_1135 | Gilli_1133 | KEGG: gfo:GFO_0344 secreted protein; SPTR: Secreted protein. | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. | 0.553 |
| EHQ01809.1 | rsgA | Gilli_1135 | Gilli_1134 | KEGG: gfo:GFO_0344 secreted protein; SPTR: Secreted protein. | Ribosome biogenesis GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.553 |
| EHQ03669.1 | dtd | Gilli_3059 | Gilli_1133 | PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; COGs: COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; InterPro IPR002130:IPR001179; KEGG: zpr:ZPR_0846 cyclophilin/FKBP-type peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; Peptidyl-prolyl cis-trans isomerase, FKBP-type; SPTR: Cyclophilin/FKBP-type peptidyl-prolyl cis-trans isomerase. | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. | 0.498 |
| EHQ04419.1 | dtd | Gilli_0269 | Gilli_1133 | (p)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. | 0.572 |
| aroA | EHQ01805.1 | Gilli_1130 | Gilli_1131 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | KEGG: gfo:GFO_0350 membrane protein; SPTR: Membrane protein. | 0.649 |
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