STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ01815.1PFAM: Protein of unknown function (DUF2807); KEGG: gfo:GFO_0336 hypothetical protein; SPTR: Putative uncharacterized protein. (253 aa)    
Predicted Functional Partners:
EHQ01817.1
PFAM: Lipid A 3-O-deacylase (PagL); InterPro IPR018550; KEGG: gfo:GFO_0335 secreted protein; PFAM: Lipid A 3-O-deacylase-related; SPTR: Secreted protein.
 
     0.917
EHQ01125.1
KEGG: gfo:GFO_1501 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.704
EHQ04285.1
KEGG: gfo:GFO_1780 membrane protein; SPTR: Membrane protein.
  
     0.682
EHQ01260.1
KEGG: gfo:GFO_1828 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.674
EHQ02271.1
KEGG: gfo:GFO_2877 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.663
EHQ01203.1
KEGG: gfo:GFO_1856 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.630
EHQ02503.1
KEGG: gfo:GFO_3546 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.624
EHQ03823.1
KEGG: gfo:GFO_2225 secreted protein; SPTR: Secreted protein.
  
     0.597
EHQ03674.1
KEGG: cat:CA2559_09433 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.585
EHQ02306.1
Ribonuclease HII; KEGG: cat:CA2559_05535 ribonuclease HII; SPTR: Ribonuclease HII.
  
     0.557
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.