Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EHQ01905.1PFAM: Gram-negative bacterial tonB protein; KEGG: cat:CA2559_13313 TonB; SPTR: TonB. (138 aa)    
Predicted Functional Partners:
EHQ01272.1
OmpA/MotB domain protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR011659:IPR006665; KEGG: gfo:GFO_1838 OmpA/MotB family outer membrane protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; WD40-like Beta Propeller; SPTR: OmpA/MotB family outer membrane protein.
 
 
 
 0.835
EHQ03241.1
PFAM: BlaR1 peptidase M56; Gram-negative bacterial tonB protein; COGs: COG4219 Antirepressor regulating drug resistance predicted signal transduction N-terminal membrane component; InterPro IPR008756; KEGG: gfo:GFO_0077 hypothetical protein; PFAM: Peptidase M56, BlaR1; SPTR: Putative uncharacterized protein.
 
  
 
0.835
EHQ02259.1
OmpA/MotB domain protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR011659:IPR006665; KEGG: gfo:GFO_2865 OmpA/MotB family outer membrane protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; WD40-like Beta Propeller; SPTR: OmpA/MotB family outer membrane protein.
 
 
 
 0.813
EHQ04038.1
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor; PFAM: CheB methylesterase; CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain; PAS fold; COGs: COG1352 Methylase of chemotaxis methyl-accepting protein; InterPro IPR000673:IPR000780:IPR013656:IPR000014; KEGG: dba:Dbac_2162 MCP methyltransferase/methylesterase CheR/CheB; PFAM: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; MCP methyltransferase, CheR-type; PAS fold-4; SMART: MCP methyltransferase, CheR-type; SPTR: MCP methyltransferase/methylester [...]
    
 0.789
EHQ03060.1
PFAM: Biopolymer transport protein ExbD/TolR; InterPro IPR003400; KEGG: gfo:GFO_0090 hypothetical protein; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Putative uncharacterized protein.
 
 
 0.773
EHQ03568.1
Transcriptional repressor, CopY family; PFAM: Penicillinase repressor; COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: gfo:GFO_0467 BlaI-like antibiotic resistance-related regulatory protein; PFAM: Penicillinase repressor; SPTR: BlaI-like antibiotic resistance-related regulatory protein.
    
  0.763
EHQ02418.1
PFAM: BlaR1 peptidase M56; InterPro IPR008756; KEGG: cao:Celal_2000 peptidase M56 blar1; PFAM: Peptidase M56, BlaR1; SPTR: Peptidase M56 BlaR1.
     
  0.762
EHQ03061.1
PFAM: Biopolymer transport protein ExbD/TolR; InterPro IPR003400; KEGG: gfo:GFO_0091 hypothetical protein; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Putative uncharacterized protein.
 
 
 0.755
EHQ02419.1
Transcriptional repressor, CopY family; PFAM: Penicillinase repressor; COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: kdi:Krodi_1428 transcriptional repressor, CopY family; PFAM: Penicillinase repressor; SPTR: Transcriptional repressor, CopY family.
    
  0.751
EHQ02289.1
PFAM: Biopolymer transport protein ExbD/TolR; COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: zpr:ZPR_3933 ExbD/TolR family biopolymer transport protein; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: ExbD/TolR family biopolymer transport protein.
 
 
 0.739
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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