STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ01905.1PFAM: Gram-negative bacterial tonB protein; KEGG: cat:CA2559_13313 TonB; SPTR: TonB. (138 aa)    
Predicted Functional Partners:
EHQ01272.1
OmpA/MotB domain protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR011659:IPR006665; KEGG: gfo:GFO_1838 OmpA/MotB family outer membrane protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; WD40-like Beta Propeller; SPTR: OmpA/MotB family outer membrane protein.
 
 
 
 0.885
EHQ02259.1
OmpA/MotB domain protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR011659:IPR006665; KEGG: gfo:GFO_2865 OmpA/MotB family outer membrane protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; WD40-like Beta Propeller; SPTR: OmpA/MotB family outer membrane protein.
 
 
 
 0.870
EHQ03060.1
PFAM: Biopolymer transport protein ExbD/TolR; InterPro IPR003400; KEGG: gfo:GFO_0090 hypothetical protein; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Putative uncharacterized protein.
 
 
 0.834
EHQ03061.1
PFAM: Biopolymer transport protein ExbD/TolR; InterPro IPR003400; KEGG: gfo:GFO_0091 hypothetical protein; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Putative uncharacterized protein.
 
 
 0.821
EHQ02289.1
PFAM: Biopolymer transport protein ExbD/TolR; COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: zpr:ZPR_3933 ExbD/TolR family biopolymer transport protein; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: ExbD/TolR family biopolymer transport protein.
 
 
 0.809
EHQ02290.1
PFAM: MotA/TolQ/ExbB proton channel family; COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: gfo:GFO_2902 MotA/TolQ/ExbB family biopolymer transport protein; PFAM: MotA/TolQ/ExbB proton channel; SPTR: MotA/TolQ/ExbB family biopolymer transport protein.
 
 
 0.761
EHQ02288.1
Outer membrane transport energization protein TonB; KEGG: zpr:ZPR_3932 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.716
EHQ01625.1
Competence/damage-inducible protein CinA; PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/damage-inducible protein CinA C-terminal domain; molybdenum cofactor synthesis domain; COGs: COG1058 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; InterPro IPR001453:IPR008136:IPR008135; KEGG: fbc:FB2170_15946 putative competence-damage inducible; PFAM: CinA, C-terminal; Molybdopterin binding; SPTR: CinA-like protein; TIGRFAM: Competence-induced protein CinA; Ci [...]
     
 0.707
EHQ01686.1
Hypothetical protein; PFAM: TonB dependent receptor; KEGG: gfo:GFO_2542 hypothetical protein; SPTR: Putative uncharacterized protein.
 
 
 0.699
EHQ03058.1
PFAM: MotA/TolQ/ExbB proton channel family; COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: gfo:GFO_0088 ExbB-like MotA/TolQ/ExbB family biopolymer transport protein; PFAM: MotA/TolQ/ExbB proton channel; SPTR: ExbB-like MotA/TolQ/ExbB family biopolymer transport protein.
  
 
 0.698
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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