STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ02007.1NAD-dependent epimerase/dehydratase; PFAM: NmrA-like family; COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: paa:Paes_1232 NmrA family protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NmrA family protein. (290 aa)    
Predicted Functional Partners:
EHQ01289.1
InterPro IPR001450; KEGG: kdi:Krodi_2456 4Fe-4S ferredoxin, iron-sulfur binding-protein; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: 4Fe-4S ferredoxin, iron-sulfur binding-protein.
   
 0.942
EHQ02008.1
FAD dependent oxidoreductase; PFAM: FAD binding domain; COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR006076; KEGG: zpr:ZPR_0373 phytoene dehydrogenase; PFAM: FAD dependent oxidoreductase; SPTR: Phytoene dehydrogenase.
 
     0.803
EHQ01889.1
PFAM: Deoxynucleoside kinase; COGs: COG1428 Deoxynucleoside kinase; InterPro IPR002624; KEGG: gfo:GFO_0303 deoxyadenosine kinase; PFAM: Deoxynucleoside kinase; SPTR: Deoxyadenosine kinase.
   
  0.782
EHQ03521.1
2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinase; PFAM: Deoxynucleoside kinase; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; COGs: COG1428 Deoxynucleoside kinase; InterPro IPR000550:IPR002624; KEGG: zpr:ZPR_3737 HppK and dNK domain-containing protein; PFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; Deoxynucleoside kinase; SPTR: HPPK and dNK domain-containing protein; TIGRFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK.
   
  0.782
EHQ04216.1
Acyl-carrier protein; PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein; KEGG: gfo:GFO_1606 acyl-carrier protein; SPTR: Acyl-carrier protein.
   
 0.767
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.767
EHQ03909.1
Phosphopantetheine-binding protein; PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein; InterPro IPR006163; KEGG: zpr:ZPR_2769 acyl-carrier protein; PFAM: Phosphopantetheine-binding; SPTR: Acyl-carrier protein.
   
 0.767
EHQ01522.1
AIG2 family protein; InterPro IPR009288; KEGG: tam:Theam_0546 AIG2 family protein; PFAM: AIG2-like; SPTR: Putative uncharacterized protein.
   
 
 0.730
EHQ02128.1
PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765:IPR007863; KEGG: zpr:ZPR_0529 peptidase M16; PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; SPTR: Peptidase M16.
  
   0.697
EHQ03292.1
PFAM: Cytochrome C and Quinol oxidase polypeptide I; COGs: COG0843 Heme/copper-type cytochrome/quinol oxidase subunit 1; InterPro IPR000883; KEGG: gfo:GFO_0167 cytochrome c oxidase subunit I; PFAM: Cytochrome c oxidase, subunit I; SPTR: Cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
    
   0.641
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.