STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ02093.1Mobilization protein C; PFAM: Type IV secretion-system coupling protein DNA-binding domain; COGs: COG3505 Type IV secretory pathway VirD4 protein; KEGG: zpr:ZPR_4129 mobilisation protein C; SPTR: Mobilisation protein C. (525 aa)    
Predicted Functional Partners:
EHQ02092.1
KEGG: zpr:ZPR_4265 mobilization protein B; SPTR: Mobilization protein B.
 
     0.939
EHQ02091.1
Hypothetical protein; PFAM: Neuroendocrine-specific golgi protein P55 (NESP55); KEGG: zpr:ZPR_4131 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.933
EHQ01586.1
Conjugation system ATPase, TraG family; PFAM: Domain of unknown function DUF87; TIGRFAM: Bacteroides conjugation system ATPase, TraG family; COGs: COG3451 Type IV secretory pathway VirB4 protein; KEGG: zpr:ZPR_1775 TraG-like protein; SPTR: TraG-like protein; TIGRFAM: Bacteroides conjugation system ATPase, TraG family.
 
  
 0.783
EHQ02110.1
Conjugation system ATPase, TraG family; PFAM: Domain of unknown function DUF87; TIGRFAM: Bacteroides conjugation system ATPase, TraG family; COGs: COG3451 Type IV secretory pathway VirB4 protein; KEGG: zpr:ZPR_1775 TraG-like protein; SPTR: TraG-like protein; TIGRFAM: Bacteroides conjugation system ATPase, TraG family.
 
  
 0.783
EHQ02113.1
KEGG: zpr:ZPR_1775 TraG-like protein; SPTR: TraG-like protein; manually curated.
 
  
 0.783
EHQ01570.1
KEGG: zpr:ZPR_4265 mobilization protein B; SPTR: Mobilization protein B.
 
     0.782
EHQ01578.1
KEGG: zpr:ZPR_1770 conserved protein found in conjugate transposon TraN; SPTR: Conserved protein found in conjugate transposon TraN; manually curated.
 
     0.782
EHQ01581.1
KEGG: zpr:ZPR_1770 conserved protein found in conjugate transposon TraN; SPTR: Conserved protein found in conjugate transposon TraN.
 
     0.782
EHQ01582.1
PFAM: Protein of unknown function (DUF3714); KEGG: zpr:ZPR_1771 TraM-like protein; SPTR: TraM-like protein.
 
     0.782
EHQ01583.1
KEGG: zpr:ZPR_1772 conserved protein found in conjugate transposon TraK; SPTR: Conserved protein found in conjugate transposon TraK.
 
     0.782
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.