STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ02153.1KEGG: mpd:MCP_1301 hypothetical protein; SPTR: Putative uncharacterized protein. (515 aa)    
Predicted Functional Partners:
EHQ02152.1
PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: mpd:MCP_1300 ABC transporter ATP binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATPase subunit.
  
  0.930
EHQ03209.1
PFAM: Periplasmic copper-binding protein (NosD); TIGRFAM: parallel beta-helix repeat (two copies); COGs: COG3420 Nitrous oxidase accessory protein; InterPro IPR007742:IPR006633:IPR006626; KEGG: gfo:GFO_1408 periplasmic copper-binding protein NosD; PFAM: Periplasmic copper-binding; SMART: Carbohydrate-binding/sugar hydrolysis domain; Parallel beta-helix repeat; SPTR: Periplasmic copper-binding protein NosD; TIGRFAM: parallel beta-helix repeat containing protein.
  
 
 0.769
EHQ02151.1
PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: cat:CA2559_13238 penicillin-binding protein, putative; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase.
       0.746
EHQ03873.1
PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: gau:GAU_3665 putative ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Putative ABC transporter ATP-binding protein.
  
  0.704
EHQ04447.1
PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: gfo:GFO_2288 ABC-type multidrug transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC-type multidrug transporter ATP-binding protein.
   
  0.689
EHQ01540.1
PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: cao:Celal_3949 sulfate-transporting atpase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Sulfate-transporting ATPase.
   
  0.689
EHQ01541.1
PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: cao:Celal_3948 sulfate-transporting atpase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Sulfate-transporting ATPase.
   
  0.689
EHQ01814.1
PFAM: ABC transporter; TIGRFAM: gliding motility-associated ABC transporter ATP-binding subunit GldA; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR019864:IPR003439:IPR003593; KEGG: gfo:GFO_0338 gliding motility protein GldA; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Gliding motility protein GldA; TIGRFAM: Gliding motility-associated ABC transporter ATP-binding subunit GldA.
   
  0.689
EHQ02762.1
PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: gfo:GFO_3275 ABC-type transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC-type transporter ATP-binding protein.
   
  0.689
EHQ03210.1
PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: gfo:GFO_1407 copper-transport ATP-binding protein NosF; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein.
   
  0.689
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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