STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ02289.1PFAM: Biopolymer transport protein ExbD/TolR; COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: zpr:ZPR_3933 ExbD/TolR family biopolymer transport protein; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: ExbD/TolR family biopolymer transport protein. (133 aa)    
Predicted Functional Partners:
EHQ02290.1
PFAM: MotA/TolQ/ExbB proton channel family; COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: gfo:GFO_2902 MotA/TolQ/ExbB family biopolymer transport protein; PFAM: MotA/TolQ/ExbB proton channel; SPTR: MotA/TolQ/ExbB family biopolymer transport protein.
 
 
 0.991
EHQ02288.1
Outer membrane transport energization protein TonB; KEGG: zpr:ZPR_3932 hypothetical protein; SPTR: Putative uncharacterized protein.
 
 
 0.962
EHQ03058.1
PFAM: MotA/TolQ/ExbB proton channel family; COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: gfo:GFO_0088 ExbB-like MotA/TolQ/ExbB family biopolymer transport protein; PFAM: MotA/TolQ/ExbB proton channel; SPTR: ExbB-like MotA/TolQ/ExbB family biopolymer transport protein.
 
 
 0.948
infB
Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
  
 
 0.836
EHQ04461.1
KEGG: gfo:GFO_2161 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
 0.835
EHQ01905.1
PFAM: Gram-negative bacterial tonB protein; KEGG: cat:CA2559_13313 TonB; SPTR: TonB.
 
 
 0.809
EHQ02287.1
FolC bifunctional protein; PFAM: Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase; COGs: COG0285 Folylpolyglutamate synthase; InterPro IPR013221:IPR001645; KEGG: gfo:GFO_2899 folylpolyglutamate synthase; PFAM: Mur ligase, central; SPTR: Folylpolyglutamate synthase; TIGRFAM: Folylpolyglutamate synthetase.
     
 0.800
EHQ02453.1
Hypothetical protein; TIGRFAM: TonB family C-terminal domain; KEGG: gfo:GFO_3039 hypothetical protein; SPTR: Putative uncharacterized protein.
 
 
 0.799
EHQ01687.1
PFAM: Tetratricopeptide repeat; COGs: COG1729 conserved hypothetical protein; InterPro IPR001440:IPR019734; KEGG: gfo:GFO_2543 hypothetical protein; PFAM: Tetratricopeptide TPR-1; SPTR: Putative uncharacterized protein.
 
 
 0.720
EHQ02291.1
PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterPro IPR006097:IPR006096; KEGG: cat:CA2559_06630 Glu/Leu/Phe/Val dehydrogenase family protein; PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation region; SPTR: Glu/Leu/Phe/Val dehydrogenase family protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
       0.639
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.