STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ02329.1KEGG: zpr:ZPR_0666 hypothetical protein; SPTR: Membrane protein. (150 aa)    
Predicted Functional Partners:
EHQ02330.1
Hypothetical protein; PFAM: Transmembrane exosortase (Exosortase_EpsH); KEGG: cat:CA2559_00545 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
 
     0.957
EHQ04193.1
KEGG: gfo:GFO_1883 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.773
EHQ02833.1
KEGG: gfo:GFO_3187 secreted protein; SPTR: Secreted protein.
  
     0.770
EHQ03311.1
Protein involved in gliding motility RemB; KEGG: gfo:GFO_0187 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.760
EHQ03659.1
Protein involved in gliding motility EpsA; PFAM: Polysaccharide biosynthesis/export protein; KEGG: zpr:ZPR_1091 polysaccharide export outer hypothetical protein; SPTR: Polysaccharide export outer membrane protein.
  
     0.752
EHQ01723.1
Hypothetical protein; PFAM: O-Antigen ligase; KEGG: gfo:GFO_0582 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.749
EHQ01729.1
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: gfo:GFO_0580 glycosyl transferase, group 1; PFAM: Glycosyl transferase, group 1; SPTR: LPS biosynthesis protein.
  
     0.749
EHQ01732.1
PFAM: Glycosyl transferase family 2; COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: gfo:GFO_0577 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, family 2; overlaps another CDS with the same product name.
  
     0.735
EHQ01764.1
Hypothetical protein; PFAM: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase; KEGG: fjo:Fjoh_0303 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.731
EHQ01733.1
PFAM: Glycosyl transferase family 2; InterPro IPR001173; KEGG: gfo:GFO_0576 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, family 2; overlaps another CDS with the same product name.
  
     0.727
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.