STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ02411.1Hypothetical protein. (51 aa)    
Predicted Functional Partners:
EHQ02407.1
Hypothetical protein.
      
0.773
EHQ02408.1
Hypothetical protein.
      
0.773
EHQ02409.1
Hypothetical protein.
      
0.773
EHQ02410.1
Hypothetical protein.
      
0.773
EHQ02412.1
Hypothetical protein.
      
0.773
EHQ02413.1
PFAM: Glycosyl transferase family 2; InterPro IPR001173; KEGG: zpr:ZPR_4199 RfbJ-like lipopolysaccharide biosynthesis glycosyl transferase; PFAM: Glycosyl transferase, family 2; SPTR: RfbJ-like lipopolysaccharide biosynthesis glycosyl transferase; overlaps another CDS with the same product name.
       0.516
EHQ02414.1
PFAM: Glycosyl transferase family 2; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: cat:CA2559_05410 glycosyltransferase; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyltransferase; overlaps another CDS with the same product name.
       0.516
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.