Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EHQ02638.1PFAM: Semialdehyde dehydrogenase, NAD binding domain; InterPro IPR000534; KEGG: cao:Celal_1270 nucleoside-diphosphate-sugar epimerase; PFAM: Semialdehyde dehydrogenase, NAD-binding; SPTR: Nucleoside-diphosphate-sugar epimerase. (230 aa)    
Predicted Functional Partners:
EHQ03592.1
PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; cytochrome c oxidase, cbb3-type, subunit I; COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR004677:IPR003468:IPR000883; KEGG: cly:Celly_2050 cytochrome c oxidase, cbb3-type subunit I; PFAM: Cytochrome C oxidase, monohaem subunit/FixO; Cytochrome c oxidase, subunit I; SPTR: Cytochrome cbb3 oxidase subunit I/III; TIGRFAM: Cytochrome c oxidase cbb3-type, subunit I; Cytochrome C oxidase, monohaem subunit/FixO; Belongs to [...]
    
   0.821
EHQ01289.1
InterPro IPR001450; KEGG: kdi:Krodi_2456 4Fe-4S ferredoxin, iron-sulfur binding-protein; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: 4Fe-4S ferredoxin, iron-sulfur binding-protein.
   
 0.818
EHQ02636.1
Hypothetical protein; PFAM: YCII-related domain; KEGG: gfo:GFO_3391 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.796
EHQ02637.1
Adenylate cyclase; PFAM: CYTH domain; COGs: COG2954 conserved hypothetical protein; InterPro IPR008172; KEGG: zpr:ZPR_0285 hypothetical protein; PFAM: Adenylate cyclase; SPTR: Putative uncharacterized protein.
       0.783
EHQ03291.1
PFAM: Cytochrome C oxidase subunit II, transmembrane domain; COGs: COG1622 Heme/copper-type cytochrome/quinol oxidase subunit 2; InterPro IPR011759; KEGG: gfo:GFO_0166 cytochrome c oxidase subunit II; PFAM: Cytochrome C oxidase subunit II, transmembrane region; SPTR: Cytochrome c oxidase subunit II.
    
   0.648
EHQ02522.1
PFAM: 2Fe-2S iron-sulfur cluster binding domain; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterPro IPR001041:IPR001450:IPR004489; KEGG: gfo:GFO_3150 succinate dehydrogenase/fumarate reductase iron-sulfur subunit; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Ferredoxin; SPTR: Succinate dehydrogenase iron-sulfur protein; TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein.
   
 
 0.614
EHQ01889.1
PFAM: Deoxynucleoside kinase; COGs: COG1428 Deoxynucleoside kinase; InterPro IPR002624; KEGG: gfo:GFO_0303 deoxyadenosine kinase; PFAM: Deoxynucleoside kinase; SPTR: Deoxyadenosine kinase.
   
  0.612
EHQ03521.1
2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinase; PFAM: Deoxynucleoside kinase; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; COGs: COG1428 Deoxynucleoside kinase; InterPro IPR000550:IPR002624; KEGG: zpr:ZPR_3737 HppK and dNK domain-containing protein; PFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; Deoxynucleoside kinase; SPTR: HPPK and dNK domain-containing protein; TIGRFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK.
   
  0.612
EHQ03292.1
PFAM: Cytochrome C and Quinol oxidase polypeptide I; COGs: COG0843 Heme/copper-type cytochrome/quinol oxidase subunit 1; InterPro IPR000883; KEGG: gfo:GFO_0167 cytochrome c oxidase subunit I; PFAM: Cytochrome c oxidase, subunit I; SPTR: Cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
    
   0.596
EHQ03099.1
Ferredoxin; PFAM: 2Fe-2S iron-sulfur cluster binding domain; InterPro IPR001041; KEGG: zpr:ZPR_0508 2Fe-2S ferredoxin; PFAM: Ferredoxin; SPTR: 2Fe-2S ferredoxin.
    
   0.562
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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