STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ02710.1Protein of unknown function DUF187; PFAM: Uncharacterised BCR, COG1649; COGs: COG1649 conserved hypothetical protein; InterPro IPR003790; KEGG: phe:Phep_1349 hypothetical protein; PFAM: Protein of unknown function DUF187; SPTR: Putative uncharacterized protein. (542 aa)    
Predicted Functional Partners:
EHQ02708.1
NLP/P60 protein; PFAM: NlpC/P60 family; Bacterial SH3 domain; COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR003646:IPR013247:IPR000064; KEGG: fbc:FB2170_06045 putative peptidase; PFAM: NLP/P60; SH3, type 3; SMART: Bacterial SH3-like region; SPTR: Putative peptidase.
 
     0.885
EHQ02709.1
PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013341:IPR013342; KEGG: gfo:GFO_3329 mandelate racemase / muconate lactonizing enzyme family protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal; SPTR: Mandelate racemase / muconate lactonizing enzyme family protein.
 
     0.849
murQ
N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
 
     0.662
EHQ01110.1
PFAM: Zinc carboxypeptidase; InterPro IPR000834; KEGG: gfo:GFO_1485 M14 family peptidase; PFAM: Peptidase M14, carboxypeptidase A; SPTR: Peptidase, family M14.
 
      0.638
EHQ02188.1
PFAM: D-Ala-D-Ala carboxypeptidase 3 (S13) family; TIGRFAM: D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family; COGs: COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4); InterPro IPR000667; KEGG: gfo:GFO_2757 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine endopeptidase; PFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C; SPTR: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine endopeptidase.
 
     0.630
EHQ02707.1
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; PFAM: N-acetylmuramoyl-L-alanine amidase; COGs: COG3023 Negative regulator of beta-lactamase expression; InterPro IPR002502; KEGG: zpr:ZPR_4700 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; SMART: N-acetylmuramoyl-L-alanine amidase, family 2; SPTR: N-acetylmuramoyl-L-alanine amidase.
     0.492
EHQ02116.1
Cell wall hydrolase/autolysin; PFAM: N-acetylmuramoyl-L-alanine amidase; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: gfo:GFO_1368 N-acetylmuramoyl-L-alanine amidase; PFAM: Cell wall hydrolase/autolysin, catalytic; SMART: Cell wall hydrolase/autolysin, catalytic; SPTR: N-acetylmuramoyl-L-alanine amidase.
 
   
  0.490
EHQ01589.1
Cell wall hydrolase/autolysin; PFAM: N-acetylmuramoyl-L-alanine amidase; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: gfo:GFO_1368 N-acetylmuramoyl-L-alanine amidase; PFAM: Cell wall hydrolase/autolysin, catalytic; SMART: Cell wall hydrolase/autolysin, catalytic; SPTR: N-acetylmuramoyl-L-alanine amidase.
 
   
  0.407
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.