STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ02759.1PFAM: Glycosyltransferase family 9 (heptosyltransferase); COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: zpr:ZPR_0050 RfaQ-like lipopolysaccharide core biosynthesis glycosyl transferase; PFAM: Glycosyl transferase, family 9; SPTR: RfaQ-like lipopolysaccharide core biosynthesis glycosyl transferase. (371 aa)    
Predicted Functional Partners:
EHQ02758.1
KEGG: zpr:ZPR_0049 hypothetical protein; SPTR: Putative uncharacterized protein.
 
    0.957
EHQ01917.1
Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.
 
  
 0.885
EHQ01289.1
InterPro IPR001450; KEGG: kdi:Krodi_2456 4Fe-4S ferredoxin, iron-sulfur binding-protein; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: 4Fe-4S ferredoxin, iron-sulfur binding-protein.
  
   0.799
EHQ02755.1
KEGG: gfo:GFO_3280 membrane protein; SPTR: Membrane protein.
       0.796
EHQ03099.1
Ferredoxin; PFAM: 2Fe-2S iron-sulfur cluster binding domain; InterPro IPR001041; KEGG: zpr:ZPR_0508 2Fe-2S ferredoxin; PFAM: Ferredoxin; SPTR: 2Fe-2S ferredoxin.
   
 
 0.789
EHQ02756.1
KEGG: cat:CA2559_02990 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
EHQ02757.1
PFAM: D12 class N6 adenine-specific DNA methyltransferase; COGs: COG3392 Adenine-specific DNA methylase; InterPro IPR012327; KEGG: gan:UMN179_01893 D12 class N6 adenine-specific DNA methyltransferase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; SPTR: Site-specific DNA-methyltransferase (Adenine-specific).
       0.773
EHQ01443.1
PFAM: Bacterial lipid A biosynthesis acyltransferase; COGs: COG1560 Lauroyl/myristoyl acyltransferase; InterPro IPR004960; KEGG: gfo:GFO_2055 lipid A biosynthesis lauroyl acyltransferase; PFAM: Bacterial lipid A biosynthesis acyltransferase; SPTR: Lipid A biosynthesis lauroyl acyltransferase.
 
  
 0.743
lpxK
lipid-A-disaccharide kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
 
 
 0.685
kdsB
3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.
 
  
 0.667
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.