STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ02898.1PFAM: Glycosyl hydrolases family 16; COGs: COG2273 Beta-glucanase/Beta-glucan synthetase; InterPro IPR000757; KEGG: fbc:FB2170_09211 beta-glucanase; PFAM: Glycoside hydrolase, family 16; SPTR: Beta-glucanase. (383 aa)    
Predicted Functional Partners:
EHQ02897.1
Hypothetical protein; PFAM: Carbohydrate binding domain; KEGG: gfo:GFO_3465 hypothetical protein; SPTR: Putative uncharacterized protein.
     0.880
EHQ02896.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: fbc:FB2170_09221 putative outer membrane protein; PFAM: RagB/SusD; SPTR: Putative outer membrane protein, probably involved in nutrient binding.
 
     0.750
EHQ02901.1
PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain; COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR001764:IPR002772; KEGG: gfo:GFO_3467 beta-glucosidase; PFAM: Glycoside hydrolase, family 3, C-terminal; Glycoside hydrolase, family 3, N-terminal; SPTR: Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
 
  0.687
EHQ02895.1
PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: fbc:FB2170_09226 putative outer membrane protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative outer membrane protein, probably involved in nutrient binding.
     0.647
EHQ02899.1
PFAM: Glycosyl hydrolases family 16; COGs: COG2273 Beta-glucanase/Beta-glucan synthetase; InterPro IPR000757; KEGG: sen:SACE_6700 secreted protein; PFAM: Glycoside hydrolase, family 16; SPTR: Putative secreted protein.
 
    
0.618
EHQ02894.1
Two component regulator three Y domain-containing protein; PFAM: Y_Y_Y domain; Bacterial regulatory proteins, luxR family; InterPro IPR000792:IPR011123; KEGG: gfo:GFO_3462 two-component system sensor histidine kinase/response regulator hybrid; PFAM: Two component regulator three Y; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; SPTR: Two-component system sensor histidine kinase/response regulator hybrid.
 
     0.615
EHQ01794.1
PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain; COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR001764:IPR002772; KEGG: gfo:GFO_0367 glycoside hydrolase family protein; PFAM: Glycoside hydrolase, family 3, N-terminal; Glycoside hydrolase, family 3, C-terminal; SPTR: Glycoside hydrolase, family 3-likely beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
 
  0.538
EHQ03185.1
KEGG: rmr:Rmar_2079 hypothetical protein; SPTR: Putative uncharacterized protein.
 
  
 0.465
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.