STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ03080.1PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: gfo:GFO_0108 dolichol-phosphate mannosyltransferase family protein; PFAM: Glycosyl transferase, family 2; SPTR: Dolichol-phosphate mannosyltransferase family protein. (243 aa)    
Predicted Functional Partners:
EHQ03081.1
PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type; COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase; InterPro IPR004722:IPR006680; KEGG: gfo:GFO_0109 dihydroorotase; PFAM: Amidohydrolase 1; SPTR: Dihydroorotase; TIGRFAM: Dihydroorotase multifunctional complex type.
       0.819
EHQ03082.1
KEGG: zpr:ZPR_0492 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.819
EHQ04104.1
PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: gfo:GFO_1061 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase; PFAM: Glycosyl transferase, family 2; SPTR: Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase.
  
  
 
0.784
EHQ03643.1
PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: zpr:ZPR_1072 glycosyl transferase; PFAM: Glycosyl transferase, family 2; SPTR: Putative glycosyl transferase.
  
  
 
0.761
EHQ03078.1
PFAM: Uroporphyrinogen-III synthase HemD; COGs: COG1587 Uroporphyrinogen-III synthase; InterPro IPR003754; KEGG: gfo:GFO_0106 uroporphyrinogen-III synthase; PFAM: Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; SPTR: Uroporphyrinogen-III synthase.
       0.606
EHQ03079.1
KEGG: gfo:GFO_0107 membrane protein; SPTR: Membrane protein.
       0.586
EHQ03773.1
PFAM: Glycosyl transferase family 2; COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: cat:CA2559_12413 glycosyltransferase; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyltransferase.
  
     0.476
EHQ02413.1
PFAM: Glycosyl transferase family 2; InterPro IPR001173; KEGG: zpr:ZPR_4199 RfbJ-like lipopolysaccharide biosynthesis glycosyl transferase; PFAM: Glycosyl transferase, family 2; SPTR: RfbJ-like lipopolysaccharide biosynthesis glycosyl transferase; overlaps another CDS with the same product name.
  
  
 
0.457
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.