STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ03175.1PFAM: ABC transporter; TIGRFAM: putative bacteriocin export ABC transporter, lactococcin 972 group; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: gfo:GFO_0716 ABC-type transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC-type transporter ATP-binding protein. (225 aa)    
Predicted Functional Partners:
EHQ03172.1
Protein of unknown function DUF214; PFAM: Predicted permease; TIGRFAM: Acidobacterial duplicated orphan permease; InterPro IPR003838; KEGG: gfo:GFO_0715 FtsX family membrane protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: FtsX family membrane protein (Predicted permease).
 
 0.995
EHQ03166.1
Protein of unknown function DUF214; PFAM: Predicted permease; InterPro IPR003838; KEGG: zpr:ZPR_4636 transporter permease protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative transporter permease protein.
 
 0.992
EHQ03168.1
Protein of unknown function DUF214; PFAM: Predicted permease; InterPro IPR003838; KEGG: gfo:GFO_0714 FtsX family membrane protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: FtsX family membrane protein (Predicted permease).
 
 0.992
EHQ02332.1
Protein of unknown function DUF214; PFAM: Predicted permease; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: gfo:GFO_2956 FtsX family membrane protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: FtsX family membrane protein (Predicted permease).
 
  0.985
EHQ04197.1
Protein of unknown function DUF214; PFAM: Predicted permease; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: cat:CA2559_10373 ABC transporter efflux protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: ABC transporter efflux protein.
 
  0.984
EHQ03322.1
Protein of unknown function DUF214; PFAM: Predicted permease; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: gfo:GFO_0197 FtsX family membrane protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: FtsX family membrane protein (Predicted permease).
 
  0.983
EHQ03323.1
Protein of unknown function DUF214; PFAM: Predicted permease; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: gfo:GFO_0198 FtsX family membrane protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: FtsX family membrane protein (Predicted permease).
 
  0.982
EHQ03167.1
Protein of unknown function DUF214; PFAM: Predicted permease; InterPro IPR003838; KEGG: zpr:ZPR_4640 ABC transporter permease; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative ABC transporter permease.
 
 0.971
EHQ03174.1
Protein of unknown function DUF214; PFAM: Predicted permease; InterPro IPR003838; KEGG: zpr:ZPR_4641 FtsX-related transmembrane transport protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative FtsX-related transmembrane transport protein.
 
  0.966
EHQ03176.1
PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: gfo:GFO_0717 HlyD family secretion protein; SPTR: HlyD family secretion protein; TIGRFAM: Secretion protein HlyD.
 
   0.956
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.