STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ03209.1PFAM: Periplasmic copper-binding protein (NosD); TIGRFAM: parallel beta-helix repeat (two copies); COGs: COG3420 Nitrous oxidase accessory protein; InterPro IPR007742:IPR006633:IPR006626; KEGG: gfo:GFO_1408 periplasmic copper-binding protein NosD; PFAM: Periplasmic copper-binding; SMART: Carbohydrate-binding/sugar hydrolysis domain; Parallel beta-helix repeat; SPTR: Periplasmic copper-binding protein NosD; TIGRFAM: parallel beta-helix repeat containing protein. (411 aa)    
Predicted Functional Partners:
EHQ03208.1
Hypothetical protein; PFAM: NosL; KEGG: fbc:FB2170_03790 hypothetical protein; SPTR: Putative uncharacterized protein.
 
 
 0.994
EHQ03207.1
KEGG: gfo:GFO_1410 hypothetical protein; SPTR: Putative uncharacterized protein.
 
 
 0.992
EHQ03211.1
KEGG: gfo:GFO_1406 nitrous-oxide metabolic protein NosY; SPTR: Nitrous-oxide metabolic protein NosY.
 
 
 0.991
EHQ03210.1
PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: gfo:GFO_1407 copper-transport ATP-binding protein NosF; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein.
 
 0.981
EHQ03206.1
Nitrous oxide reductase apoprotein; PFAM: Cytochrome C oxidase subunit II, periplasmic domain; COGs: COG4263 Nitrous oxide reductase; InterPro IPR002429; KEGG: fbc:FB2170_03800 nitrous oxide reductase; PFAM: Cytochrome c oxidase subunit II C-terminal; SPTR: Nitrous oxide reductase.
 
  
 0.952
EHQ03204.1
PFAM: Cytochrome c; InterPro IPR003088; KEGG: gfo:GFO_1413 cytochrome c heme binding domain-containing protein; PFAM: Cytochrome c, class I; SPTR: Protein containing cytochrome c heme binding domain.
 
  
 0.869
EHQ04448.1
KEGG: zpr:ZPR_3111 hypothetical protein; SPTR: Membrane protein.
  
 
 0.830
EHQ04046.1
TIGRFAM: gliding motility-associated ABC transporter permease protein GldF; InterPro IPR019860; KEGG: zpr:ZPR_1833 gliding motility protein GldF; SPTR: Gliding motility protein GldF; TIGRFAM: Gliding motility-associated ABC transporter permease protein GldF.
  
 
 0.830
EHQ02153.1
KEGG: mpd:MCP_1301 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
 0.769
nadA
Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
       0.709
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.