STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ03335.1Outer membrane chaperone Skp (OmpH); PFAM: Outer membrane protein (OmpH-like); InterPro IPR005632; KEGG: gfo:GFO_0210 OmpH family outer membrane protein; PFAM: Outer membrane chaperone Skp (OmpH); SPTR: OmpH family outer membrane protein. (182 aa)    
Predicted Functional Partners:
EHQ03336.1
Outer membrane chaperone Skp (OmpH); PFAM: Outer membrane protein (OmpH-like); InterPro IPR005632; KEGG: gfo:GFO_0211 OmpH family outer membrane protein; PFAM: Outer membrane chaperone Skp (OmpH); SPTR: OmpH family outer membrane protein.
 
     0.936
EHQ03337.1
PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827:IPR000184:IPR016474; KEGG: zpr:ZPR_0618 surface antigen D15 family outer hypothetical protein; PFAM: Bacterial surface antigen (D15); Surface antigen variable number; SPTR: Surface antigen D15 family outer membrane protein; TIGRFAM: Outer membrane assembly protein, YaeT.
 
  
 0.923
EHQ03339.1
KEGG: gfo:GFO_0214 hypothetical protein; SPTR: Putative uncharacterized protein.
 
 
   0.812
EHQ04400.1
KEGG: gfo:GFO_0794 TPR repeat-containing protein; SPTR: Protein containing tetratricopeptide repeats.
  
    0.696
EHQ02001.1
PFAM: Surface antigen; InterPro IPR000184; KEGG: zpr:ZPR_0933 surface antigen protein; PFAM: Bacterial surface antigen (D15); SPTR: Surface antigen protein.
 
  
 0.682
EHQ03264.1
PFAM: Protein of unknown function (DUF2723); KEGG: gfo:GFO_0145 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.662
EHQ02174.1
Membrane protein involved in aromatic hydrocarbon degradation; PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX); InterPro IPR005017; KEGG: zpr:ZPR_3783 outer membrane transport protein; PFAM: Membrane protein, aromatic hydrocarbon degradation; SPTR: Outer membrane transport protein.
  
     0.646
EHQ02518.1
KEGG: gfo:GFO_3531 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.645
EHQ03338.1
Undecaprenyl pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
       0.644
EHQ03477.1
PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: PPIC-type PPIASE domain; InterPro IPR000297; KEGG: gfo:GFO_2506 PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SPTR: PpiC-type peptidyl-prolyl cis-trans isomerase.
 
  
 0.644
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.