STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ03458.1Regulatory protein MarR; PFAM: MarR family; InterPro IPR000835; KEGG: gfo:GFO_2665 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: MarR family transcriptional regulator protein. (150 aa)    
Predicted Functional Partners:
EHQ03457.1
PFAM: Nitroreductase family; COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: gfo:GFO_2666 nitroreductase; PFAM: Nitroreductase-like; SPTR: Nitroreductase.
  
 
  0.849
EHQ03286.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR001450:IPR006311; KEGG: gfo:GFO_0161 iron-sulfur binding oxidoreductase; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Iron-sulfur binding oxidoreductase.
  
  
  0.749
EHQ03456.1
YceI family protein; PFAM: YceI-like domain; InterPro IPR007372; KEGG: gfo:GFO_2667 hypothetical protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SPTR: Putative uncharacterized protein; Belongs to the UPF0312 family.
       0.744
EHQ03459.1
PFAM: Rhodanese-like domain; COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: cao:Celal_2361 rhodanese-like protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Rhodanese-like protein.
  
    0.431
EHQ03455.1
PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR006805:IPR015890; KEGG: zpr:ZPR_0835 anthranilate synthase component I; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal; SPTR: Anthranilate synthase component I.
       0.423
EHQ03285.1
Quinol:cytochrome c oxidoreductase pentaheme cytochrome subunit; PFAM: Class III cytochrome C family; Cytochrome c; InterPro IPR003088; KEGG: gfo:GFO_0160 cytochrome c domain-containing protein; PFAM: Cytochrome c, class I; SPTR: Membrane protein containing cytochrome c domain.
  
 
  0.420
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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