STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ03569.1Na+/Ca+ antiporter, CaCA family; PFAM: Sodium/calcium exchanger protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger related-protein; COGs: COG0530 Ca2+/Na+ antiporter; InterPro IPR004481:IPR004837; KEGG: zpr:ZPR_3156 sodium/calcium exchanger protein; PFAM: Sodium/calcium exchanger membrane region; SPTR: Sodium/calcium exchanger protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger-like. (314 aa)    
Predicted Functional Partners:
EHQ03567.1
PFAM: BlaR1 peptidase M56; TonB-dependent Receptor Plug Domain; InterPro IPR008756:IPR012910; KEGG: gfo:GFO_0466 BlaR1 peptidase M56 family protein; PFAM: Peptidase M56, BlaR1; TonB-dependent receptor, plug; SPTR: BlaR1-like family M56 peptidase.
       0.545
EHQ03568.1
Transcriptional repressor, CopY family; PFAM: Penicillinase repressor; COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: gfo:GFO_0467 BlaI-like antibiotic resistance-related regulatory protein; PFAM: Penicillinase repressor; SPTR: BlaI-like antibiotic resistance-related regulatory protein.
       0.545
EHQ03570.1
PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase type III N terminal; COGs: COG3968 Uncharacterized protein related to glutamine synthetase; InterPro IPR008146; KEGG: gfo:GFO_0471 glutamine synthetase; PFAM: Glutamine synthetase, catalytic region; SPTR: Glutamine synthetase.
       0.515
EHQ03667.1
KpsF/GutQ family protein; PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein; COGs: COG0794 sugar phosphate isomerase involved in capsule formation; InterPro IPR004800:IPR001347:IPR000644; KEGG: cat:CA2559_12348 sugar isomerase, KpsF/GutQ family protein; PFAM: Sugar isomerase (SIS); Cystathionine beta-synthase, core; SPTR: Sugar isomerase, KpsF/GutQ family protein; TIGRFAM: KpsF/GutQ; Belongs to the SIS family. GutQ/KpsF subfamily.
    
 0.444
EHQ02715.1
Sodium/proton antiporter, CPA1 family; PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; COGs: COG0025 NhaP-type Na+/H+ and K+/H+ antiporter; InterPro IPR006153:IPR003148; KEGG: gfo:GFO_3322 sodium/hydrogen exchanger family protein; PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal; SPTR: Sodium/hydrogen exchanger family protein.
   
 
 0.408
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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