STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ03586.1KEGG: chu:CHU_3385 hypothetical protein; SPTR: Putative uncharacterized protein. (318 aa)    
Predicted Functional Partners:
EHQ03587.1
Multiple antibiotic resistance (MarC)-related protein; PFAM: MarC family integral membrane protein; TIGRFAM: membrane protein, MarC family; COGs: COG2095 Multiple antibiotic transporter; InterPro IPR002771; KEGG: zpr:ZPR_3142 MarC family integral hypothetical protein; PFAM: Multiple antibiotic resistance (MarC)-related; SPTR: MarC family integral membrane protein; TIGRFAM: Multiple antibiotic resistance (MarC)-related.
       0.516
EHQ04498.1
PFAM: Endonuclease/Exonuclease/phosphatase family; InterPro IPR005135; KEGG: cly:Celly_0146 endonuclease I; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease I.
  
     0.477
EHQ02619.1
KEGG: sli:Slin_6300 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.422
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.