STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ03607.1PFAM: Peptidase family M49; InterPro IPR005317; KEGG: gfo:GFO_0057 peptidase family M49; PFAM: Peptidase M49, dipeptidyl-peptidase III; SPTR: Peptidase, family M49. (683 aa)    
Predicted Functional Partners:
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
    
 0.889
EHQ01637.1
Heat shock protein Hsp90; Molecular chaperone. Has ATPase activity.
   
 0.870
dnaK
Chaperone protein dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.864
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.862
EHQ02699.1
Multi-sensor signal transduction histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; CHASE3 domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR001610:IPR003661:IPR003594:IPR 007891:IPR013655:IPR013656; KEGG: fba:FIC_01552 two-component system sensor histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; CHASE3; PAS fold-3; PAS fold-4; SMART: ATP-binding region, ATPa [...]
   
 0.846
EHQ03604.1
PFAM: Nitrogen regulatory protein P-II; COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187; KEGG: zpr:ZPR_3133 P-II family protein; PFAM: Nitrogen regulatory protein PII; SPTR: P-II family protein; Belongs to the P(II) protein family.
   
 
 0.838
EHQ01520.1
Adenylate/guanylate cyclase with GAF sensor(s); PFAM: Adenylate and Guanylate cyclase catalytic domain; Protein kinase domain; GAF domain; COGs: COG3899 ATPase; InterPro IPR002290:IPR001054:IPR017442:IPR003018; KEGG: ter:Tery_2857 adenylate/guanylate cyclase; PFAM: Adenylyl cyclase class-3/4/guanylyl cyclase; Serine/threonine-protein kinase-like domain; GAF; SMART: Serine/threonine-protein kinase domain; Adenylyl cyclase class-3/4/guanylyl cyclase; SPTR: Serine/threonine kinase with two-component sensor domain.
  
 0.832
EHQ02924.1
PFAM: CheB methylesterase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; CheR methyltransferase, SAM binding domain; His Kinase A (phosphoacceptor) domain; CheR methyltransferase, all-alpha domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG1352 Methylase of chemotaxis methyl-accepting protein; InterProIPR000014:IPR000780:IPR001610:IPR003661:IPR 003594:IPR000673:IPR013767:IPR013656:IPR013655; KEGG: gfo:GFO_1684 two-component system sensor histidine kinase/methyl-esterase/transferase hybrid; PFAM: ATP-binding region, ATPase-like; PAS fold-3; Signal transduction response re [...]
   
 0.809
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.805
EHQ03677.1
Hypothetical protein; PFAM: RNA polymerase Rpb6; KEGG: cat:CA2559_09448 hypothetical protein; SPTR: Putative uncharacterized protein.
 
  0.774
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.