STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ03679.1KEGG: gfo:GFO_0651 hypothetical protein; SPTR: Putative uncharacterized protein. (296 aa)    
Predicted Functional Partners:
EHQ03678.1
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.
     0.942
EHQ03677.1
Hypothetical protein; PFAM: RNA polymerase Rpb6; KEGG: cat:CA2559_09448 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.933
EHQ03676.1
TIGRFAM: outer membrane assembly lipoprotein YfiO; COGs: COG4105 DNA uptake lipoprotein; InterPro IPR017689; KEGG: zpr:ZPR_3247 nuclear transition protein; SPTR: Nuclear transition protein; TIGRFAM: Outer membrane assembly lipoprotein YfiO.
 
     0.901
EHQ03307.1
Protein involved in gliding motility SprA; KEGG: gfo:GFO_0182 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.773
EHQ02284.1
KEGG: gfo:GFO_2891 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.771
EHQ01984.1
KEGG: gfo:GFO_0399 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.766
EHQ03336.1
Outer membrane chaperone Skp (OmpH); PFAM: Outer membrane protein (OmpH-like); InterPro IPR005632; KEGG: gfo:GFO_0211 OmpH family outer membrane protein; PFAM: Outer membrane chaperone Skp (OmpH); SPTR: OmpH family outer membrane protein.
  
     0.756
EHQ03680.1
DNA replication and repair protein RecN; May be involved in recombinational repair of damaged DNA.
 
     0.756
EHQ01999.1
Putative protein-translocating porin PorT; KEGG: gfo:GFO_0387 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.746
EHQ02763.1
Protein involved in gliding motility SprE; InterPro IPR019734; KEGG: gfo:GFO_3274 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.731
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.